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Proteomics/phosphoproteomics of left ventricular biopsies from patients with surgical coronary revascularization and pigs with coronary occlusion/reperfusion: remote ischemic preconditioning

机译:外科冠状动脉血运重建术患者和冠状动脉闭塞/再灌注猪的左心室活检的蛋白质组学/磷蛋白组学:远程缺血预处理

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摘要

Remote ischemic preconditioning (RIPC) by repeated brief cycles of limb ischemia/reperfusion reduces myocardial ischemia/reperfusion injury. In left ventricular (LV) biopsies from patients undergoing coronary artery bypass grafting (CABG), only the activation of signal transducer and activator of transcription 5 was associated with RIPC’s cardioprotection. We have now used an unbiased, non-hypothesis-driven proteomics and phosphoproteomics approach to analyze LV biopsies from patients undergoing CABG and from pigs undergoing coronary occlusion/reperfusion without (sham) and with RIPC. False discovery rate-based statistics identified a higher prostaglandin reductase 2 expression at early reperfusion with RIPC than with sham in patients. In pigs, the phosphorylation of 116 proteins was different between baseline and early reperfusion with RIPC and/or with sham. The identified proteins were not identical for patients and pigs, but in-silico pathway analysis of proteins with ≥2-fold higher expression/phosphorylation at early reperfusion with RIPC in comparison to sham revealed a relation to mitochondria and cytoskeleton in both species. Apart from limitations of the proteomics analysis per se, the small cohorts, the sampling/sample processing and the number of uncharacterized/unverifiable porcine proteins may have contributed to this largely unsatisfactory result.
机译:通过肢体缺血/再灌注的反复短暂循环进行的远程缺血预处理(RIPC)减少了心肌缺血/再灌注损伤。在接受冠状动脉旁路移植术(CABG)的患者的左心室(LV)活检中,只有RIPC的心脏保护与信号转导子和转录激活子5的激活有关。现在,我们已经使用了无偏见,无假设驱动的蛋白质组学和磷酸化蛋白质组学方法来分析接受CABG的患者以及未经(假)和RIPC进行冠状动脉闭塞/再灌注的猪的LV活检。基于错误发现率的统计数据表明,与患者假手术相比,RIPC早期再灌注时前列腺素还原酶2的表达更高。在猪中,使用RIPC和/或假手术在基线和早期再灌注之间116种蛋白质的磷酸化程度不同。对于患者和猪,鉴定出的蛋白质并不相同,但是与假手术相比,使用RIPC进行早期再灌注时,表达/磷酸化的蛋白质/磷酸化程度高2倍的计算机模拟分析表明,这两个物种均与线粒体和细胞骨架有关。除了蛋白质组学分析本身的局限性外,较小的队列,采样/样品处理以及未定性/无法验证的猪蛋白的数量可能也导致了这种很大程度上不令人满意的结果。

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