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Translational Physiology: Transcriptome profiling reveals novel BMI- and sex-specific gene expression signatures for human cardiac hypertrophy

机译:翻译生理学:转录组分析揭示了人类心脏肥大的新型BMI和性别特异性基因表达特征

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摘要

How obesity or sex may affect the gene expression profiles of human cardiac hypertrophy is unknown. We hypothesized that body-mass index (BMI) and sex can affect gene expression profiles of cardiac hypertrophy. Human heart tissues were grouped according to sex (male, female), BMI (lean<25 kg/m2, obese>30 kg/m2), or left ventricular hypertrophy (LVH) and non-LVH nonfailed controls (NF). We identified 24 differentially expressed (DE) genes comparing female with male samples. In obese subgroup, there were 236 DE genes comparing LVH with NF; in lean subgroup, there were seven DE genes comparing LVH with NF. In female subgroup, we identified 1,320 significant genes comparing LVH with NF; in male subgroup, there were 1,383 significant genes comparing LVH with NF. There were seven significant genes comparing obese LVH with lean NF; comparing male obese LVH with male lean NF samples we found 106 significant genes; comparing female obese LVH with male lean NF, we found no significant genes. Using absolute value of log2 fold-change > 2 or extremely small P value (10−20) as a criterion, we identified nine significant genes (HBA1, HBB, HIST1H2AC, GSTT1, MYL7, NPPA, NPPB, PDK4, PLA2G2A) in LVH, also found in published data set for ischemic and dilated cardiomyopathy in heart failure. We identified a potential gene expression signature that distinguishes between patients with high BMI or between men and women with cardiac hypertrophy. Expression of established biomarkers atrial natriuretic peptide A (NPPA) and B (NPPB) were already significantly increased in hypertrophy compared with controls.
机译:肥胖或性别如何影响人类心脏肥大的基因表达谱尚不清楚。我们假设身体质量指数(BMI)和性别可以影响心脏肥大的基因表达谱。根据性别(男性,女性),BMI(瘦<25 kg / m 2 ,肥胖> 30 kg / m 2 )或左心室对人体心脏组织进行分组肥大(LVH)和非LVH非失败对照(NF)。我们确定了24个差异表达(DE)基因,将女性和男性样品进行比较。在肥胖亚组中,有236个DE基因比较LVH和NF。在瘦肉亚组中,有七个DE基因比较LVH和NF。在女性亚组中,我们鉴定了1,320个重要基因,将LVH与NF进行了比较。在男性亚组中,有1383个重要基因与LVH和NF进行比较。有7个重要的基因将肥胖的LVH与瘦型NF进行比较。将男性肥胖的LVH与男性瘦的NF样本进行比较,我们发现了106个重要基因。比较女性肥胖LVH和男性瘦NF,我们没有发现明显的基因。使用log2倍数变化的绝对值> 2或极小的P值(10 −20 )作为标准,我们鉴定了9个重要基因(HBA1,HBB,HIST1H2AC,GSTT1,MYL7,NPPA,NPPB ,LVD中的PDK4,PDK4,PLA2G2A),也已在心力衰竭的缺血性和扩张型心肌病的已发表数据集中找到。我们确定了一个潜在的基因表达特征,可以区分高BMI患者或心脏肥大的男性和女性。与对照相比,肥大中已建立的生物标志物心钠素A(NPPA)和B(NPPB)的表达已明显增加。

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