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Evolution of Flux Control in the Glucosinolate Pathway in Arabidopsis thaliana

机译:拟南芥葡萄糖苷途径中通量控制的演变

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摘要

Network characteristics of biochemical pathways are believed to influence the rate of evolutionary change in constituent enzymes. One characteristic that may affect rate heterogeneity is control of the amount of product produced by a biochemical pathway or flux control. In particular, theoretical analyses suggest that adaptive substitutions should be concentrated in the enzyme(s) that exert the greatest control over flux. Although a handful of studies have found a correlation between position in a pathway and evolutionary rate, these investigations have not examined the relationship between evolutionary rate and flux control. Given that genes with greater control will experience stronger selection and that the probability of fixation is proportional to the selective advantage, we ask the following: 1) do upstream enzymes have majority flux control, 2) do enzymes with majority flux control accumulate adaptive substitutions, and 3) are upstream enzymes under higher selective constraint? First, by perturbing the enzymes in the aliphatic glucosinolate pathway in Arabidopsis thaliana with gene insertion lines, we show that flux control is focused in the first enzyme in the pathway. Next, by analyzing several sequence signatures of selection, we also show that this enzyme is the only one in the pathway that shows convincing evidence of selection. Our results support the hypothesis that natural selection preferentially acts on enzymes with high flux control.
机译:据信,生化途径的网络特征会影响组成酶的进化变化速率。可能影响速率异质性的一个特征是对通过生化途径或流量控制产生的产物量的控制。特别是,理论分析表明,自适应取代应集中在对通量具有最大控制作用的酶中。尽管少数研究发现了路径中的位置与进化速率之间的相关性,但这些研究并未研究进化速率与通量控制之间的关系。鉴于控制力更强的基因将经历更强的选择,且固定的可能性与选择优势成正比,我们提出以下要求:1)上游酶是否具有多数流量控制,2)具有多数流量控制的酶会积累适应性替代, 3)上游酶是否在较高的选择性约束下?首先,通过用基因插入线干扰拟南芥中脂肪族芥子油苷途径中的酶,我们显示通量控制集中在途径中的第一个酶上。接下来,通过分析选择的几个序列特征,我们还显示该酶是途径中唯一显示令人信服的选择证据的酶。我们的结果支持以下假设:自然选择优先作用于具有高通量控制的酶。

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