首页> 美国卫生研究院文献>OMICS : a Journal of Integrative Biology >How Does Mother-to-Child Transmission of HIV Differ Among African Populations? Lessons from MBL2 Genetic Variation in Zimbabweans
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How Does Mother-to-Child Transmission of HIV Differ Among African Populations? Lessons from MBL2 Genetic Variation in Zimbabweans

机译:非洲人群中母婴传播艾滋病毒的方式有何不同?津巴布韦人MBL2遗传变异的经验教训

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摘要

Mannose binding lectin (MBL) is a pathogen pattern recognition protein involved in antimicrobial activities. Variation in MBL2 gene has been extensively implicated in differential outcomes of infectious diseases in studies conducted outside Africa, but virtually very little is known on the role of this candidate gene in the African continent. We investigated human genetic variations in MBL2 in a Zimbabwean pediatric population and their putative associations with HIV infection in perinatally exposed children. One hundred and four children aged 7 to 9 years comprising 68 perinatally exposed to HIV (32 who were born infected and 36 who were uninfected) and 36 unexposed controls were recruited. DNA samples were genotyped for MBL2 polymorphisms using PCR-RFLP and sequencing. HIV infected children had markedly variable and significantly lower mean height (p=0.03) and weight (p=0.005) when compared to the uninfected children. Using all samples, frequencies for MBL2 genetic variants for the Zimbabwean population were calculated. Twelve single nucleotide polymorphisms were observed and minor alleles occurred with the following frequencies: −550C>G (G: 0.02), −435G>A (A: 0.08), −428A>C (C: 0.39), −394A>G (A: 0.39), −328AGAGAA ins/del (AGAGAA ins: 0.44), −245G>A (A: 0.05), −221C>G (C: 0.12), −111A>T (T: 0.10), −70C>T (C: 0.46), +4C>T (C: 0.45), novel −595G>A (A: 0.02), and 170G>A (0.24). We found that the MBL2 +4T variant displayed a trend for association with reduced risk of HIV transmission from mother-to-child but the remaining vast majority of the genetic markers did not show a significant association. We conclude (1) the MBL2 gene is highly polymorphic in the Zimbabwean population, and (2) MBL2 genetic variation does not appear to play a major role in influencing the risk of mother-to-child HIV transmission in our study sample. These observations contest the hitherto significant role of this candidate gene for HIV transmission from mother-to-child in non-African populations and thus, further speak to the limits of extrapolating genomic association studies directly to the African populations from studies conducted elsewhere. It is hoped that more OMICS research in a diverse set of African countries can shed further light on the putative role (or the lack thereof ) of this candidate gene in HIV transmission in the continent, a major global health burden in Africa.
机译:甘露糖结合凝集素(MBL)是一种涉及抗菌活性的病原体模式识别蛋白。在非洲以外的研究中,MBL2基因的变异已广泛涉及传染病的不同结局,但实际上对该候选基因在非洲大陆的作用知之甚少。我们调查了津巴布韦儿童人群中MBL2的人类遗传变异及其在围生期暴露的儿童中与HIV感染的推定关联。招募了104名7至9岁的儿童,包括68名围生期暴露于HIV的儿童(32名出生时被感染,36名未感染时)和36名未暴露的对照。使用PCR-RFLP和测序对DNA样品进行MBL2多态性基因分型。与未感染的儿童相比,感染了HIV的儿童的平均身高(p = 0.03)和体重(p = 0.005)明显不同,并且明显较低。使用所有样本,计算了津巴布韦人群MBL2遗传变异的频率。观察到十二个单核苷酸多态性,并以以下频率出现次要等位基因:-550C> G(G:0.02),-435G> A(A:0.08),-428A> C(C:0.39),-394A> G( A:0.39),-328AGAGAA ins / del(AGAGAA ins:0.44),-245G> A(A:0.05),-221C> G(C:0.12),-111A> T(T:0.10),-70C> T(C:0.46),+ 4C> T(C:0.45),新型-595G> A(A:0.02)和170G> A(0.24)。我们发现MBL2 + 4T变体显示出与从母婴传播HIV的风险降低相关的趋势,但其余的绝大多数遗传标记均未显示显着相关性。我们得出的结论是:(1)在津巴布韦人群中,MBL2基因高度多态,(2)在我们的研究样本中,MBL2的遗传变异似乎并未对影响母婴HIV传播的风险起主要作用。这些观察结果与该候选基因迄今为止在非非洲人群中从母婴传播艾滋病毒的重要作用相抗衡,因此,进一步论证了从其他地方进行的研究直接将基因组关联研究外推到非洲人群的局限性。希望在不同的非洲国家中进行更多的OMICS研究可以进一步阐明该候选基因在非洲艾滋病毒传播中的假定作用(或缺乏),这是非洲主要的全球健康负担。

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