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Computational Analysis of Cell Dynamics in Videos with Hierarchical-Pooled Deep-Convolutional Features

机译:具有分层池深度卷积特征的视频中的细胞动力学计算分析

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摘要

>Computational analysis of cellular appearance and its dynamics is used to investigate physiological properties of cells in biomedical research. In consideration of the great success of deep learning in video analysis, we first introduce two-stream convolutional networks (ConvNets) to automatically learn the biologically meaningful dynamics from raw live-cell videos. However, the two-stream ConvNets lack the ability to capture long-range video evolution. Therefore, a novel hierarchical pooling strategy is proposed to model the cell dynamics in a whole video, which is composed of trajectory pooling for short-term dynamics and rank pooling for long-range ones. Experimental results demonstrate that the proposed pipeline effectively captures the spatiotemporal dynamics from the raw live-cell videos and outperforms existing methods on our cell video database.
机译:>细胞外观及其动力学的计算分析用于研究生物医学研究中细胞的生理特性。考虑到深度学习在视频分析中的巨大成功,我们首先引入了两流卷积网络(ConvNets),可以从原始活细胞视频中自动学习具有生物学意义的动态。但是,两流ConvNets缺乏捕获远程视频演变的能力。因此,提出了一种新颖的分层池策略来对整个视频中的细胞动力学进行建模,该策略由用于短期动力学的轨迹池和用于远程动力学的秩池组成。实验结果表明,提出的管道可以有效地捕获原始活细胞视频的时空动态,并且优于我们细胞视频数据库中的现有方法。

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