SummaryWe present Edlib, an open-source C/C ++ library for exact pairwise sequence alignment using edit distance. We compare Edlib to other libraries and show that it is the fastest while not lacking in functionality and can also easily handle very large sequences. Being easy to use, flexible, fast and low on memory usage, we expect it to be easily adopted as a building block for future bioinformatics tools.
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机译:总结我们介绍了Edlib,这是一个开放源C / C ++++库,用于使用编辑距离进行精确的成对序列比对。我们将Edlib与其他库进行了比较,并表明它是最快的,同时不缺少功能,并且还可以轻松处理非常大的序列。由于易于使用,灵活,快速且内存使用率低,我们希望它可以很容易地用作未来生物信息学工具的基础。
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