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An automatic segmentation and classification framework for anti-nuclear antibody images

机译:抗核抗体图像的自动分割和分类框架

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摘要

Autoimmune disease is a disorder of immune system due to the over-reaction of lymphocytes against one's own body tissues. Anti-Nuclear Antibody (ANA) is an autoantibody produced by the immune system directed against the self body tissues or cells, which plays an important role in the diagnosis of autoimmune diseases. Indirect ImmunoFluorescence (IIF) method with HEp-2 cells provides the major screening method to detect ANA for the diagnosis of autoimmune diseases. Fluorescence patterns at present are usually examined laboriously by experienced physicians through manually inspecting the slides with the help of a microscope, which usually suffers from inter-observer variability that limits its reproducibility. Previous researches only provided simple segmentation methods and criterions for cell segmentation and recognition, but a fully automatic framework for the segmentation and recognition of HEp-2 cells had never been reported before. This study proposes a method based on the watershed algorithm to automatically detect the HEp-2 cells with different patterns. The experimental results show that the segmentation performance of the proposed method is satisfactory when evaluated with percent volume overlap (PVO: 89%). The classification performance using a SVM classifier designed based on the features calculated from the segmented cells achieves an average accuracy of 96.90%, which outperforms other methods presented in previous studies. The proposed method can be used to develop a computer-aided system to assist the physicians in the diagnosis of auto-immune diseases.
机译:自身免疫性疾病是由于淋巴细胞对自身身体组织的过度反应而导致的免疫系统疾病。抗核抗体(ANA)是由针对人体组织或细胞的免疫系统产生的自身抗体,在诊断自身免疫性疾病中起着重要的作用。 HEp-2细胞的间接免疫荧光(IIF)方法提供了检测ANA的主要筛选方法,以诊断自身免疫性疾病。当前,荧光模式通常由经验丰富的医师通过在显微镜的帮助下通过手动检查载玻片来进行费力地检查,该显微镜通常存在观察者间差异,从而限制了其再现性。先前的研究仅提供了简单的分割方法和细胞分割和识别标准,但是从未有过关于HEp-2细胞分割和识别的全自动框架的报道。本研究提出了一种基于分水岭算法的自动检测具有不同模式的HEp-2细胞的方法。实验结果表明,与体积重叠百分比(PVO:89%)一起评估时,该方法的分割效果令人满意。使用基于从分割后的单元格计算出的特征而设计的SVM分类器进行的分类性能可实现96.90%的平均准确度,这优于先前研究中提出的其他方法。所提出的方法可用于开发计算机辅助系统,以协助医师诊断自身免疫性疾病。

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