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Computational Model for Cell Migration in Three-Dimensional Matrices

机译:三维矩阵中细胞迁移的计算模型

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摘要

Although computational models for cell migration on two-dimensional (2D) substrata have described how various molecular and cellular properties and physiochemical processes are integrated to accomplish cell locomotion, the same issues, along with certain new ones, might contribute differently to a model for migration within three-dimensional (3D) matrices. To address this more complicated situation, we have developed a computational model for cell migration in 3D matrices using a force-based dynamics approach. This model determines an overall locomotion velocity vector, comprising speed and direction, for individual cells based on internally generated forces transmitted into external traction forces and considering a timescale during which multiple attachment and detachment events are integrated. Key parameters characterize cell and matrix properties, including cell/matrix adhesion and mechanical and steric properties of the matrix; critical underlying molecular properties are incorporated explicitly or implicitly. Model predictions agree well with experimental results for the limiting case of migration on 2D substrata as well as with recent experiments in 3D natural tissues and synthetic gels. Certain predicted features such as biphasic behavior of speed with density of matrix ligands for 3D migration are qualitatively similar to their 2D counterparts, but new effects generally absent in 2D systems, such as effects due to matrix sterics and mechanics, are now predicted to arise in many 3D situations. As one particular sample manifestation of these effects, the optimal levels of cell receptor expression and matrix ligand density yielding maximal migration are dependent on matrix mechanical compliance.
机译:尽管二维(2D)基质上细胞迁移的计算模型已经描述了如何整合各种分子和细胞特性以及理化过程来完成细胞运动,但是相同的问题以及某些新问题可能会对迁移模型做出不同的贡献在三维(3D)矩阵中。为了解决这种更为复杂的情况,我们使用基于力的动力学方法开发了3D矩阵中细胞迁移的计算模型。该模型基于内部生成的传递到外部牵引力中的力并考虑整合多个附着和分离事件的时间范围,确定单个细胞的总体运动速度矢量,包括速度和方向。关键参数表征细胞和基质的特性,包括细胞/基质的粘附以及基质的机械和空间特性;关键的潜在分子特性被显式或隐式合并。模型预测与在2D基质上迁移的极限情况的实验结果以及在3D天然组织和合成凝胶中的最新实验非常吻合。某些预测特征(例如速度与基质配体密度的双相行为,用于3D迁移)在质量上类似于其2D对应特征,但是现在预计在2D系统中通常不存在新的效应,例如由于基质空间和力学造成的效应。许多3D情况。作为这些作用的一种特殊的样品表现,细胞受体表达的最佳水平和产生最大迁移的基质配体密度取决于基质的机械顺应性。

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