首页> 美国卫生研究院文献>Biophysical Journal >A milling crowd model for local and long-range obstructed lateral diffusion. Mobility of excimeric probes in the membrane of intact erythrocytes.
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A milling crowd model for local and long-range obstructed lateral diffusion. Mobility of excimeric probes in the membrane of intact erythrocytes.

机译:局部和远程受阻横向扩散的铣削人群模型。激基探针在完整红细胞膜中的移动性。

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摘要

A new model for lateral diffusion, the milling crowd model (MC), is proposed and is used to derive the dependence of the monomeric and excimeric fluorescence yields of excimeric membrane probes on their concentration. According to the MC model, probes migrate by performing spatial exchanges with a randomly chosen nearest neighbor (lipid or probe). Only nearest neighbor probes, one of which is in the excited state, may form an excimer. The exchange frequency, and hence the local lateral diffusion coefficient, may then be determined from experiment with the aid of computer simulation of the excimer formation kinetics. The same model is also used to study the long-range lateral diffusion coefficient of probes in the presence of obstacles (e.g., membrane proteins). The dependence of the monomeric and excimeric fluorescence yields of 1-pyrene-dodecanoic acid probes on their concentration in the membranes of intact erythrocytes was measured and compared with the prediction of the MC model. The analysis yields an excimer formation rate for nearest neighbor molecules of approximately 1 X 10(7) s-1 and an exchange frequency of approximately greater than 2 X 10(7) s-1, corresponding to a local diffusion coefficient of greater than 3 X 10(-8) cm2 s-1. This value is several times larger than the long-range diffusion coefficient for a similar system measured in fluorescence photobleaching recovery experiments. The difference is explained by the fact that long-range diffusion is obstructed by dispersed membrane proteins and is therefore greatly reduced when compared to free diffusion. The dependence of the diffusion coefficient on the fractional area covered by obstacles and on their size is derived from MC simulations and is compared to those of other theories lateral diffusibility.
机译:提出了一种侧向扩散的新模型,即铣削人群模型(MC),该模型用于推导赋形体膜探针的单体和赋形体荧光产量对浓度的依赖性。根据MC模型,探针通过与随机选择的最近邻居(脂质或探针)进行空间交换而迁移。只有最近的相邻探针(其中一个处于激发态)才能形成准分子。然后可以借助计算机模拟准分子形成动力学从实验中确定交换频率,从而确定局部横向扩散系数。同样的模型还用于研究在存在障碍物(例如膜蛋白)的情况下探针的远程横向扩散系数。测量了1-py-十二烷酸探针的单体和激基荧光产量对它们在完整红细胞膜中浓度的依赖性,并将其与MC模型的预测进行了比较。该分析得出的最接近邻居分子的准分子形成速率约为1 X 10(7)s-1,交换频率约为2 X 10(7)s-1,对应于局部扩散系数大于3 X 10(-8)cm2 s-1。该值是在荧光光漂白回收实验中测得的类似系统远距离扩散系数的几倍。差异的解释是由于分散的膜蛋白阻碍了远距离扩散,因此与自由扩散相比大大减少了。扩散系数对障碍物所覆盖的分数区域及其大小的依赖性是通过MC模拟得出的,并与其他理论的横向扩散性进行了比较。

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