首页> 美国卫生研究院文献>Biomarker Insights >FTIR Microspectroscopy Coupled with Two-Class Discrimination Segregates Markers Responsible for Inter- and Intra-Category Variance in Exfoliative Cervical Cytology
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FTIR Microspectroscopy Coupled with Two-Class Discrimination Segregates Markers Responsible for Inter- and Intra-Category Variance in Exfoliative Cervical Cytology

机译:FTIR显微技术结合两类区分隔离标记负责剥脱型宫颈细胞学的分类间和分类内差异

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摘要

Infrared (IR) absorbance of cellular biomolecules generates a vibrational spectrum, which can be exploited as a “biochemical fingerprint” of a particular cell type. Biomolecules absorb in the mid-IR (2–20 μm) and Fourier-transform infrared (FTIR) microspectroscopy applied to discriminate different cell types (exfoliative cervical cytology collected into buffered fixative solution) was evaluated. This consisted of cervical cytology free of atypia (i.e. normal; n = 60), specimens categorised as containing low-grade changes (i.e. CIN1 or LSIL; n = 60) and a further cohort designated as high-grade (CIN2/3 or HSIL; n = 60). IR spectral analysis was coupled with principal component analysis (PCA), with or without subsequent linear discriminant analysis (LDA), to determine if normal versus low-grade versus high-grade exfoliative cytology could be segregated. With increasing severity of atypia, decreases in absorbance intensity were observable throughout the 1,500 cm−1 to 1,100 cm−1 spectral region; this included proteins (1,460 cm−1), glycoproteins (1,380 cm−1), amide III (1,260 cm−1), asymmetric (νas) PO2 (1,225 cm−1) and carbohydrates (1,155 cm−1). In contrast, symmetric (νs) PO2 (1,080 cm−1) appeared to have an elevated intensity in high-grade cytology. Inter-category variance was associated with protein and DNA conformational changes whereas glycogen status strongly influenced intra-category. Multivariate data reduction of IR spectra using PCA with LDA maximises inter-category variance whilst reducing the influence of intra-class variation towards an objective approach to class cervical cytology based on a biochemical profile.
机译:细胞生物分子的红外(IR)吸收会产生振动光谱,可以将其用作特定细胞类型的“生化指纹”。生物分子在中红外(2–20μm)中吸收,并应用傅立叶变换红外(FTIR)显微技术区分不同的细胞类型(剥脱子宫颈细胞学收集到固定液中)。这包括无异型的宫颈细胞学检查(即正常; n = 60),被分类为包含低度变化(例如CIN1或LSIL; n = 60)的样本以及另一个被指定为高度(CIN2 / 3或HSIL)的队列; n = 60)。红外光谱分析与主成分分析(PCA)结合进行或不进行随后的线性判别分析(LDA),以确定是否可以分离正常的,低级的与高级的剥脱性细胞学。随着非典型性严重程度的增加,在1,500 cm -1 至1,100 cm -1 光谱范围内的吸光度降低。其中包括蛋白质(1,460 cm -1 ),糖蛋白(1,380 cm -1 ),酰胺III(1,260 cm -1 ),不对称( νas)PO2 -(1,225 cm -1 )和碳水化合物(1,155 cm -1 )。相反,对称(vs)PO2 -(1,080 cm -1 )在高级细胞学中似乎具有增强的强度。类别间差异与蛋白质和DNA构象变化有关,而糖原状态强烈影响类别内。使用PCA和LDA进行IR光谱的多变量数据缩减可最大程度地提高类别间的差异,同时减少类别间变异对基于生化特征的子宫颈细胞学客观方法的影响。

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