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A new system for the automatic estimation of endothelial cell density in donor corneas

机译:一种自动估算供体角膜内皮细胞密度的新系统

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摘要

>Aims: The problem of automatic estimation of endothelial cell density from microscopy images in donor corneas was addressed.>Methods: The spatial frequencies contained in digital endothelium images are extracted with a two dimension discrete Fourier transform (DFT) technique. A circular band in the DFT of the images is shown to contain the frequency information related to the cell density. An algorithm for reliably recovering this spatial frequency information and for extracting from it an estimate of endothelial cell density has been developed and implemented in a computer program. An evaluation was performed on a data set containing 100 donor corneas, by comparing automatic values with manual counts performed by three eye bank experts on two images for each cornea.>Results: The mean difference of automatic densities v manual ones was 14 cells/mm2 (0.9%), with a standard deviation of 119 cells/mm2 (5.1%) and mean absolute difference of 92 cells/mm2(3.9%). The ANOVA based overall inter-rater reliability was 0.935. The algorithm was also capable of identifying all non-processable images. Running times were in the order of 1–2 seconds per image.>Conclusion: A new algorithm was developed for the fully automatic estimation of endothelial cell density. The results of a clinical evaluation on 100 corneas suggest that it is capable of reliably estimating endothelium cell density in donor corneas.
机译:>目的:解决了从供体角膜的显微镜图像自动估计内皮细胞密度的问题。>方法:数字血管内皮图像中包含的空间频率是二维提取的离散傅里叶变换(DFT)技术。图像的DFT中的圆形带显示为包含与细胞密度有关的频率信息。已经开发了一种算法,该算法用于可靠地恢复该空间频率信息并从中提取内皮细胞密度的估计值,并在计算机程序中实现该算法。通过比较自动值与三眼银行专家对每个角膜的两幅图像进行的手动计数,对包含100个供体角膜的数据集进行了评估。>结果:自动密度与手动的平均差单位为14个/ mm 2 (0.9%),标准偏差为119个/ mm 2 (5.1%),平均绝对差为92个/ mm < sup> 2 (3.9%)。基于ANOVA的整体评分者之间的可靠性为0.935。该算法还能够识别所有不可处理的图像。每张图像的运行时间约为1-2秒。>结论:开发了一种用于全自动估算内皮细胞密度的新算法。对100个角膜的临床评估结果表明,它能够可靠地估计供体角膜中的内皮细胞密度。

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