首页> 美国卫生研究院文献>Standards in Genomic Sciences >Draft genome of Myxosarcina sp. strain GI1 a baeocytous cyanobacterium associated with the marine sponge Terpios hoshinota
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Draft genome of Myxosarcina sp. strain GI1 a baeocytous cyanobacterium associated with the marine sponge Terpios hoshinota

机译:粘鳞藻的基因组草图菌株GI1与海海绵Terpios hoshinota相关的嗜盐蓝细菌

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摘要

To date, genome sequences (complete or in draft form) from only six baeocytous cyanobacteria in four genera have been reported: Xenococcus, Chroococcidiopsis, Pleurocapsa, and Stanieria. To expand our knowledge on the diversity of baeocytous cyanobacteria, this study sequenced the genome of GI1, which is a Myxosarcina-like baeocytous cyanobacterium. GI1 is of interest not only because of its phylogenetic niche, but also because it is a cyanobiont isolated from the marine cyanobacteriosponge Terpios hoshinota, which has been shown to cause the death of corals. The ~7 Mb draft GI1 genome contains 6,891 protein-coding genes and 62 RNA genes. A comparison of genomes among the sequenced baeocytous cyanobacterial strains revealed the existence or absence of numerous discrete genes involved in nitrogen metabolism. It will be interesting to determine whether these genes are important for cyanobacterial adaptations and interactions between cyanobionts and their marine sponge hosts.
机译:迄今为止,已经报道了四个属中仅六个细菌细胞蓝细菌的基因组序列(完整或处于草图形式):异球菌,嗜蓝球菌,侧耳菌属和斯坦氏菌。为了扩展我们对嗜盐细胞蓝细菌多样性的认识,本研究对GI1的基因组进行了测序,GI1是一种类似于粘虫的嗜盐细胞蓝藻细菌。 GI1不仅因为它的系统发育生态位,而且因为它是从海洋蓝藻海绵体中分离出来的一种氰基苯甲酸酯而引起人们的兴趣,该物种已被证明会导致珊瑚死亡。 〜7 Mb草案GI1基因组包含6,891个蛋白质编码基因和62个RNA基因。测序的嗜蓝藻蓝细菌菌株之间的基因组比较表明存在或不存在参与氮代谢的众多离散基因。确定这些基因对于蓝细菌的适应及其在蓝藻和它们的海洋海绵宿主之间的相互作用是否重要很重要。

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