首页> 美国卫生研究院文献>Standards in Genomic Sciences >Complete genome sequence of Pseudomonas fluorescens strain PICF7 an indigenous root endophyte from olive (Olea europaea L.) and effective biocontrol agent against Verticillium dahliae
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Complete genome sequence of Pseudomonas fluorescens strain PICF7 an indigenous root endophyte from olive (Olea europaea L.) and effective biocontrol agent against Verticillium dahliae

机译:荧光假单胞菌菌株PICF7的完整基因组序列这是一种来自橄榄(油橄榄)的本地根内生菌并且是对抗黄萎病的有效生物防治剂。

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摘要

Pseudomonas fluorescens strain PICF7 is a native endophyte of olive roots. Previous studies have shown this motile, Gram-negative, non-sporulating bacterium is an effective biocontrol agent against the soil-borne fungus Verticillium dahliae, the causal agent of one of the most devastating diseases for olive (Olea europaea L.) cultivation. Here, we announce and describe the complete genome sequence of Pseudomonas fluorescens strain PICF7 consisting of a circular chromosome of 6,136,735 bp that encodes 5,567 protein-coding genes and 88 RNA-only encoding genes. Genome analysis revealed genes predicting factors such as secretion systems, siderophores, detoxifying compounds or volatile components. Further analysis of the genome sequence of PICF7 will help in gaining insights into biocontrol and endophytism.
机译:荧光假单胞菌菌株PICF7是橄榄根的天然内生菌。以前的研究表明,这种能运动的,革兰氏阴性,非孢子形成的细菌是一种有效的生物防治剂,可对抗土壤传播的真菌黄萎病菌(Verticillium dahliae),这是造成橄榄(Olea europaea L.)最具破坏性的疾病之一的病因。在这里,我们宣布并描述了荧光假单胞菌PICF7的完整基因组序列,该基因组由6,136,735 bp的圆形染色体组成,可编码5567个蛋白质编码基因和88个仅RNA编码基因。基因组分析揭示了预测诸如分泌系统,铁载体,排毒化合物或挥发性成分等因素的基因。 PICF7基因组序列的进一步分析将有助于获得对生物防治和内生菌的见识。

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