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RNA sequencing reveals a complete but an unconventional type of dosage compensation in the domestic silkworm Bombyx mori

机译:RNA测序揭示了家蚕Bombyx mori中完整但非常规的剂量补偿类型

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摘要

Sex chromosomal dose difference between sexes is often normalized by a gene regulatory mechanism called dosage compensation (DC). Studies indicate that DC mechanisms are generally effective in XY rather than ZW systems. However, DC studies in lepidopterans (ZW system) gave bewildering results. In Manduca sexta, DC was complete and in Plodia interpunctella, it was incomplete. In Heliconius species, dosage was found to be partly incomplete. In domesticated silkmoth Bombyx mori, DC studies have yielded contradictory results thus far, showing incomplete DC based on microarray data and a possible existence of DC based on recent reanalysis of same data. In this study, analysis of B. mori sexed embryos (78, 96 and 120 h) and larval heads using RNA sequencing suggest an onset of DC at 120 h. The average Z-linked expression is substantially less than autosomes, and the male-biased Z-linked expression observed at initial stages (78 and 96 h) gets almost compensated at 120 h embryonic stage and perfectly compensated in heads. Based on these findings, we suggest a complete but an unconventional type of DC, which may be achieved by reduced Z-linked expression in males (ZZ). To our knowledge, this is the first next-generation sequencing report showing DC in B. mori, clarifying the previous contradictions.
机译:性别之间的性别染色体剂量差异通常通过称为剂量补偿(DC)的基因调节机制进行归一化。研究表明,DC机制通常在XY而不是ZW系统中有效。然而,在鳞翅目(ZW系统)中的DC研究给出了令人困惑的结果。在马六甲(Manduca sexta)中,DC是完整的,而在穿lo(Plodia interpunctella)中,DC是不完整的。在Heliconius物种中,发现剂量部分不完全。迄今为止,在驯养的蚕蛾家蚕中,DC研究得出了相互矛盾的结果,表明基于微阵列数据的DC不完整,而根据最近对相同数据的重新分析,DC可能存在。在这项研究中,使用RNA测序对桑蚕性胚胎(78、96和120 h)和幼虫头部的分析表明DC在120 h起病。平均Z连锁表达明显低于常染色体,并且在初始阶段(78和96 h)观察到的男性偏向Z连锁表达在胚胎120 h阶段几乎得到补偿,并且在头部得到了完美的补偿。基于这些发现,我们建议采用完整但非常规的DC类型,这可以通过减少雄性Z连锁表达(ZZ)来实现。据我们所知,这是第一份显示桑蚕中DC的下一代测序报告,阐明了先前的矛盾。

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