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A simulation method for calculating the absolute entropy and free energy of fluids: Application to liquid argon and water

机译:计算流体的绝对熵和自由能的模拟方法:在液态氩和水中的应用

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摘要

The hypothetical scanning (HS) method is a general approach for calculating the absolute entropy and free energy by analyzing Boltzmann samples obtained by Monte Carlo (MC) or molecular dynamics techniques. With HS applied to a fluid, each configuration i of the sample is reconstructed by adding its atoms gradually to the initially empty volume, i.e., by placing them in their positions at i using transition probabilities (TPs). At each step of the process, the volume is divided into two parts, the already visited part (the “past”) and the “future” part, where obtaining the TP requires calculating partition functions over the future part in the presence of the frozen past. In recent publications, the TPs were calculated approximately by taking into account only partial future. Here we present a “complete HSMC” procedure, where the TPs are calculated from MC simulations carried out over the complete future. The complete HSMC method is applied to systems of liquid argon and the TIP3P model of water, and very good results for the free energy are obtained, as compared with results obtained by thermodynamic integration.
机译:假设扫描(HS)方法是通过分析通过蒙特卡洛(MC)或分子动力学技术获得的玻尔兹曼样本来计算绝对熵和自由能的通用方法。将HS应用于流体后,通过将其原子逐渐添加到最初的空体积中,即通过使用跃迁概率(TP)将它们放置在i处的位置,来重构样品的每个配置i。在该过程的每个步骤中,将卷分为两个部分,即已访问过的部分(“过去”)和“未来”部分,其中要获得TP,需要在存在冻结的情况下计算将来部分的分区函数过去。在最近的出版物中,目标价格仅通过考虑部分未来来近似计算。在这里,我们提出了一个“完整的HSMC”程序,其中的TP是根据整个未来进行的MC模拟计算得出的。完整的HSMC方法应用于液氩系统和水的TIP3P模型,与通过热力学积分获得的结果相比,获得了非常好的自由能结果。

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