首页> 美国卫生研究院文献>Acta Crystallographica Section E: Crystallographic Communications >Sodium rubidium hydrogen citrate NaRbHC6H5O7 and sodium caesium hydrogen citrate NaCsHC6H5O7: crystal structures and DFT comparisons
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Sodium rubidium hydrogen citrate NaRbHC6H5O7 and sodium caesium hydrogen citrate NaCsHC6H5O7: crystal structures and DFT comparisons

机译:柠檬酸氢rub钠NaRbHC6H5O7和柠檬酸氢铯钠NaCsHC6H5O7:晶体结构和DFT比较

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摘要

The crystal structure of sodium rubidium hydrogen citrate, NaRbHC6H5O7 or [NaRb(C6H6O7)]n, has been solved and refined using laboratory powder X-ray diffraction data, and optimized using density functional techniques. This compound is isostructural to NaKHC6H5O7. The Na atom is six-coordinate, with a bond-valence sum of 1.16. The Rb atom is eight-coordinate, with a bond-valence sum of 1.17. The distorted [NaO6] octa­hedra share edges to form chains along the a-axis direction. The irregular [RbO8] coordination polyhedra share edges with the [NaO6] octa­hedra on either side of the chain, and share corners with other Rb atoms, resulting in triple chains along the a-axis direction. The most prominent feature of the structure is the chain along [111] of very short, very strong hydrogen bonds; the O⋯O distances are 2.426 and 2.398 Å. The Mulliken overlap populations in these hydrogen bonds are 0.140 and 0.143 electrons, which correspond to hydrogen-bond energies of about 20.3 kcal mol−1. The crystal structure of sodium caesium hydrogen citrate, NaCsHC6H5O7 or [NaCs(C6H6O7)]n, has also been solved and refined using laboratory powder X-ray diffraction data, and optimized using density functional techniques. The Na atom is six-coordinate, with a bond-valence sum of 1.15. The Cs atom is eight-coordinate, with a bond-valence sum of 0.97. The distorted trigonal–prismatic [NaO6] coordination polyhedra share edges to form zigzag chains along the b-axis direction. The irregular [CsO8] coordination polyhedra share edges with the [NaO6] polyhedra to form layers parallel to the (101) plane, unlike the isolated chains in NaKHC6H5O7 and NaRbHC6H5O7. A prominent feature of the structure is the chain along [100] of very short, very strong O—H⋯O hydrogen bonds; the refined O⋯O distances are 2.398 and 2.159 Å, and the optimized distances are 2.398 and 2.347 Å. The Mulliken overlap populations in these hydrogen bonds are 0.143 and 0.133 electrons, which correspond to hydrogen-bond energies about 20.3 kcal mol−1.
机译:柠檬酸钠氢柠檬酸钠NaRbHC6H5O7或[NaRb(C6H6O7)] n的晶体结构已使用实验室粉末X射线衍射数据进行了解析和精制,并使用密度泛函技术进行了优化。该化合物与NaKHC6H5O7是同构的。 Na原子为六坐标,键价和为1.16。 Rb原子为八坐标,键价和为1.17。扭曲的[NaO6]八面体共享边缘以沿a轴方向形成链。不规则的[RbO8]配位多面体与[NaO6]八面体在链的任一侧共享边,并与其他Rb原子共享角,从而沿a轴方向生成三链。该结构最突出的特征是沿着[111]的短而非常强的氢键形成的链。 O⋯O距离为2.426和2.398Å。这些氢键中的Mulliken重叠种群为0.140和0.143个电子,对应于约20.3 kcal mol -1 的氢键能。柠檬酸氢铯钠,NaCsHC6H5O7或[NaCs(C 6 H 6 O 7 ]] n ,也已使用实验室粉末X射线衍射数据进行了解析和改进,并使用密度泛函技术进行了优化。 Na原子是六坐标的,键价和为1.15。 Cs原子为八坐标,键价和为0.97。扭曲的三角棱晶[NaO 6 ]配位多面体共享边,沿b轴方向形成锯齿形链。不规则的[CsO 8 ]配位多面体与[NaO 6 ]多面体共享边以形成平行于(101)平面的层,这与NaKHC 6 H 5 O 7 和NaRbHC 6 H 5 O 7 。该结构的显着特征是沿着[100]的非常短,非常强的O-H = O氢键形成的链。精确的O⋯O距离为2.398和2.159Å,优化的距离为2.398和2.347Å。这些氢键中的Mulliken重叠种群为0.143和0.133个电子,对应于约20.3 kcal mol -1 的氢键能。

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