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Metrics for Assessing Cytoskeletal Orientational Correlations and Consistency

机译:评估细胞骨架定向相关性和一致性的指标

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摘要

In biology, organization at multiple scales potentiates biological function. Current advances in staining and imaging of biological tissues provide a wealth of data, but there are few metrics to quantitatively describe these findings. In particular there is a need for a metric that would characterize the correlation and consistency of orientation of different biological constructs within a tissue. We aimed to create such a metric and to demonstrate its use with images of cardiac tissues. The co-orientational order parameter (COOP) was based on the mathematical framework of a classical parameter, the orientational order parameter (OOP). Theorems were proven to illustrate the properties and boundaries of the COOP, which was then applied to both synthetic and experimental data. We showed the COOP to be useful for quantifying the correlation of orientation of constructs such as actin filaments and sarcomeric Z-lines. As expected, cardiac tissues showed perfect correlation between actin filaments and Z-lines. We also demonstrated the use of COOP to quantify the consistency of construct orientation within cells of the same shape. The COOP provides a quantitative tool to characterize tissues beyond co-localization or single construct orientation distribution. In the future, this new parameter could be used to represent the quantitative changes during maturation of cardiac tissue, pathological malformation, and other processes.
机译:在生物学中,多种规模的组织增强了生物学功能。生物组织染色和成像的最新进展提供了大量数据,但是很少有指标可以定量描述这些发现。特别地,需要一种表征组织内不同生物构建体的取向的相关性和一致性的度量。我们旨在创建这样一个指标,并通过心脏组织图像来证明其用途。共向顺序参数(COOP)基于经典参数,即定向顺序参数(OOP)的数学框架。证明定理可以说明COOP的性质和边界,然后将其应用于合成和实验数据。我们显示了COOP对于量化诸如肌动蛋白丝和肌节Z线等构建体的方向相关性很有用。如预期的那样,心脏组织显示肌动蛋白丝和Z线之间的完美关联。我们还演示了使用COOP量化相同形状的细胞内构建体方向的一致性。 COOP提供了定量工具来表征超出共定位或单个构建体方向分布的组织。将来,此新参数可用于表示心脏组织成熟,病理畸形和其他过程期间的定量变化。

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