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Evaluating the Adequacy of Gravity Models as a Description of Human Mobility for Epidemic Modelling

机译:评估重力模型作为流行病模型人类流动性的描述

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摘要

Gravity models have a long history of use in describing and forecasting the movements of people as well as goods and services, making them a natural basis for disease transmission rates over distance. In agent-based micro-simulations, gravity models can be directly used to represent movement of individuals and hence disease. In this paper, we consider a range of gravity models as fits to movement data from the UK and the US. We examine the ability of synthetic networks generated from fitted models to match those from the data in terms of epidemic behaviour; in particular, times to first infection. For both datasets, best fits are obtained with a two-piece ‘matched’ power law distance distribution. Epidemics on synthetic UK networks match well those on data networks across all but the smallest nodes for a range of aggregation levels. We derive an expression for time to infection between nodes in terms of epidemiological and network parameters which illuminates the influence of network clustering in spread across networks and suggests an approximate relationship between the log-likelihood deviance of model fit and the match times to infection between synthetic and data networks. On synthetic US networks, the match in epidemic behaviour is initially poor and sensitive to the initially infected node. Analysis of times to infection indicates a failure of models to capture infrequent long-range contact between large nodes. An assortative model based on node population size captures this heterogeneity, considerably improving the epidemiological match between synthetic and data networks.
机译:重力模型在描述和预测人员以及货物和服务的移动方面具有悠久的历史,使其成为远距离疾病传播率的自然基础。在基于代理的微观模拟中,重力模型可以直接用于代表个体的运动,从而代表疾病。在本文中,我们考虑了一系列重力模型,这些模型适合来自英国和美国的运动数据。我们研究了由拟合模型生成的综合网络与流行病行为方面的数据相匹配的能力。特别是第一次感染的时间。对于这两个数据集,两件式的“匹配”幂律距离分布可得到最佳拟合。合成英国网络上的流行病与数据网络上的流行病非常匹配,除了最小的节点外,在一定的聚合水平范围内。我们根据流行病学和网络参数得出节点间感染时间的表达式,该表达式阐明了网络群集在整个网络中传播的影响,并提出了模型拟合的对数似然偏差与合成之间的感染匹配时间之间的近似关系和数据网络。在合成的美国网络上,流行病的匹配最初很差,并且对最初感染的节点敏感。对感染时间的分析表明,模型无法捕获大型节点之间的罕见远程接触。基于节点人口规模的分类模型捕获了这种异质性,从而大大改善了合成网络与数据网络之间的流行病学匹配。

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