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A Survival-Adjusted Quantal-Response Test for Analysis of Tumor Incidence Rates in Animal Carcinogenicity Studies

机译:在动物致癌性研究中分析肿瘤发生率的生存调整后的量子响应测试

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摘要

In rodent cancer bioassays, groups of animals are exposed to different doses of a chemical of interest and followed for tumor occurrence. The resulting tumor rates are commonly analyzed using a survival-adjusted Cochran-Armitage (CA) trend test. The CA trend test has reasonable power when the tumor-response curve is linear in dose, but it may be underpowered for a nonlinear response. An alternative survival-adjusted test procedure based on isotonic regression methodology has previously been proposed. Although this alternative procedure performs well when the tumor response is nonlinear in dose, it has less power than the CA trend test when the response is linear in dose. Here, we introduce a new survival-adjusted test procedure that makes use of both the CA trend test and the isotonic regression-based trend test. Using a broad range of experimental conditions typical of National Toxicology Program (NTP) bioassays, we conducted extensive computer simulations to compare the false-positive error rate and power of the proposed procedure with the survival-adjusted CA trend test. The new procedure competes well with the survival-adjusted CA trend test when observed tumor rates are linear in dose and performs substantially better when observed tumor rates are nonlinear in dose. Further, the proposed trend test almost always has a smaller false-positive rate than does the survival-adjusted CA trend test. We also developed an order-restricted inference-based procedure for performing multiple pairwise comparisons between each of the dose groups and the control group. The trend test and the multiple pairwise comparisons test are demonstrated using an example from a study conducted by the NTP.
机译:在啮齿动物癌症生物测定中,将动物群暴露于不同剂量的目标化学物质中,然后进行肿瘤发生。通常使用生存调整的Cochran-Armitage(CA)趋势测试来分析所得的肿瘤发生率。当肿瘤反应曲线的剂量呈线性时,CA趋势测试具有合理的功效,但对于非线性反应而言可能不足。先前已经提出了一种基于等渗回归方法的生存调整试验方法。尽管当肿瘤反应剂量呈非线性时,这种替代方法效果很好,但与剂量趋势呈线性时相比,CA趋势测试的功效要弱。在这里,我们介绍了一种新的生存调整测试程序,该程序同时使用了CA趋势测试和基于等渗回归的趋势测试。我们使用了国家毒理学计划(NTP)生物测定的典型实验条件,我们进行了广泛的计算机模拟,以比较拟议程序的假阳性错误率和功效与经生存调整的CA趋势测试进行比较。当观察到的肿瘤发生率与剂量呈线性关系时,新方法可与经生存调整的CA趋势测试很好地竞争,而当观察到的肿瘤发生率与剂量呈非线性关系时,新方法的性能要好得多。此外,提出的趋势测试几乎总是比生存调整后的CA趋势测试具有更小的假阳性率。我们还开发了一种基于顺序限制的推理程序,可以在每个剂量组和对照组之间进行多次成对比较。趋势测试和成对的多重比较测试是通过NTP的一项研究实例证明的。

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