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Biodegradation of Tetralin: Genomics Gene Function and Regulation

机译:Tetralin的生物降解:基因组学基因功能和调控。

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摘要

Tetralin (1,2,3,4-tetrahydonaphthalene) is a recalcitrant compound that consists of an aromatic and an alicyclic ring. It is found in crude oils, produced industrially from naphthalene or anthracene, and widely used as an organic solvent. Its toxicity is due to the alteration of biological membranes by its hydrophobic character and to the formation of toxic hydroperoxides. Two unrelated bacteria, Sphingopyxis granuli strain TFA and Rhodococcus sp. strain TFB were isolated from the same niche as able to grow on tetralin as the sole source of carbon and energy. In this review, we provide an overview of current knowledge on tetralin catabolism at biochemical, genetic and regulatory levels in both strains. Although they share the same biodegradation strategy and enzymatic activities, no evidences of horizontal gene transfer between both bacteria have been found. Moreover, the regulatory elements that control the expression of the gene clusters are completely different in each strain. A special consideration is given to the complex regulation discovered in TFA since three regulatory systems, one of them involving an unprecedented communication between the catabolic pathway and the regulatory elements, act together at transcriptional and posttranscriptional levels to optimize tetralin biodegradation gene expression to the environmental conditions.
机译:Tetralin(1,2,3,4-四氢萘)是一种顽固性化合物,由芳香族和脂环族组成。它存在于从萘或蒽工业生产的原油中,并广泛用作有机溶剂。它的毒性归因于其疏水特性引起的生物膜的改变以及有毒氢过氧化物的形成。两种不相关的细菌,Sphingopyxis granuli菌株TFA和Rhodococcus sp。菌株TFB是从相同的生境中分离出来的,因为它只能在四氢化萘上生长,是唯一的碳和能源。在这篇综述中,我们提供了两种菌株在生化,遗传和调节水平上有关四氢萘分解代谢的最新知识的概述。尽管它们具有相同的生物降解策略和酶活性,但尚未发现两种细菌之间水平基因转移的证据。此外,每个菌株中控制基因簇表达的调控元件完全不同。要特别考虑TFA中发现的复杂调控,因为三个调控系统(其中一个涉及分解代谢途径与调控元件之间的空前交流)在转录和转录后水平上共同起作用,以优化四氢化萘生物降解基因在环境条件下的表达。

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