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Occurrence and abundance of a mariner-like element in freshwater and terrestrial planarians (Platyhelminthes Tricladida) from southern Brazil

机译:来自巴西南部的淡水和陆生平面虫(PlatyhelminthesTricladida)中类似水手元素的出现和丰度

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摘要

Transposable elements are DNA sequences present in all the large phylogenetic groups, both capable of changing position within the genome and constituting a significant part of eukaryotic genomes. The mariner family of transposons is one of the few which occurs in a wide variety of taxonomic groups, including freshwater planarians. Nevertheless, so far only five planarian species have been reported to carry mariner-like elements (MLEs), although several different species have been investigated. Regarding the number of copies of MLEs, Girardia tigrina is the only planarian species in which this has been evaluated, with an estimation of 8,000 copies of the element per haploid genome. Preliminary results obtained in our laboratory demonstrated that MLE is found in a large number of different species of planarians, including terrestrial. With this in mind, the aim was to evaluate the occurrence and estimate the number of MLE copies in different planarian species collected in south Brazil. Twenty-eight individuals from 15 planarian species were analyzed. By using PCR and the hybridization of nucleic acids, it was found that MLE was present in all the analyzed species, the number of copies being high, probably over 103 per haploid genome.
机译:转座因子是存在于所有大型系统发生群中的DNA序列,既能改变基因组中的位置又能构成真核生物基因组的重要部分。 Mariner转座子家族是出现在包括淡水涡虫在内的各种生物分类学中的少数几个之一。然而,尽管已经研究了几种不同的物种,但到目前为止,仅报道了五个平面类物种携带了海手状元素(MLE)。关于MLEs的拷贝数,Girardia tigrina是唯一被评估过的涡虫物种,每个单倍体基因组估计有8,000个元素的拷贝。在我们的实验室中获得的初步结果表明,在包括陆生在内的许多不同种类的涡虫中都发现了MLE。考虑到这一点,目的是评估在巴西南部收集的不同平面虫物种中发生的MLE副本并估计其数量。分析了来自15种平面动物的28个个体。通过PCR和核酸杂交,发现MLE存在于所有被分析物种中,拷贝数很高,每个单倍体基因组可能超过10 3

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