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Towards Reinforced Brain Tumor Segmentation on MRI Images Based on Temperature Changes on Pathologic Area

机译:基于病理区域温度变化的MRI图像增强脑肿瘤分割

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摘要

Brain tumor segmentation is the process of separating the tumor from normal brain tissues; in clinical routine, it provides useful information for diagnosis and treatment planning. However, it is still a challenging task due to the irregular form and confusing boundaries of tumors. Tumor cells thermally represent a heat source; their temperature is high compared to normal brain cells. The main aim of the present paper is to demonstrate that thermal information of brain tumors can be used to reduce false positive and false negative results of segmentation performed in MRI images. Pennes bioheat equation was solved numerically using the finite difference method to simulate the temperature distribution in the brain; Gaussian noises of ±2% were added to the simulated temperatures. Canny edge detector was used to detect tumor contours from the calculated thermal map, as the calculated temperature showed a large gradient in tumor contours. The proposed method is compared to Chan–Vese based level set segmentation method applied to T1 contrast-enhanced and Flair MRI images of brains containing tumors with ground truth. The method is tested in four different phantom patients by considering different tumor volumes and locations and 50 synthetic patients taken from BRATS 2012 and BRATS 2013. The obtained results in all patients showed significant improvement using the proposed method compared to segmentation by level set method with an average of 0.8% of the tumor area and 2.48% of healthy tissue was differentiated using thermal images only. We conclude that tumor contours delineation based on tumor temperature changes can be exploited to reinforce and enhance segmentation algorithms in MRI diagnostic.
机译:脑肿瘤分割是将肿瘤与正常脑组织分离的过程。在临床常规中,它为诊断和治疗计划提供了有用的信息。然而,由于肿瘤的不规则形式和混乱的边界,这仍然是一项艰巨的任务。肿瘤细胞从热上代表热源。与正常的脑细胞相比,它们的温度很高。本文的主要目的是证明脑肿瘤的热信息可用于减少在MRI图像中进行分割的假阳性和假阴性结果。利用有限差分法对Pennes生物热方程进行数值求解,以模拟大脑中的温度分布。将±2%的高斯噪声添加到模拟温度中。由于计算的温度在肿瘤轮廓中显示出较大的梯度,因此使用Canny边缘检测器从计算的热图中检测肿瘤轮廓。将该方法与基于Chan-Vese的水平集分割方法进行了比较,该方法适用于T1增强对比图像和Flair MRI图像,其中包含具有真实事实的肿瘤的大脑。通过考虑不同的肿瘤体积和位置以及来自BRATS 2012和BRATS 2013的50名综合患者,在4位不同的幻像患者中测试了该方法。与采用水平集分割和仅使用热图像就能分辨出平均肿瘤面积的0.8%和健康组织的2.48%。我们得出的结论是,可以利用基于肿瘤温度变化的肿瘤轮廓线轮廓来增强和增强MRI诊断中的分割算法。

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