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Dimensionality Reduction in Complex Medical Data: Improved Self-Adaptive Niche Genetic Algorithm

机译:复杂医学数据的降维:改进的自适应小生境遗传算法

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摘要

With the development of medical technology, more and more parameters are produced to describe the human physiological condition, forming high-dimensional clinical datasets. In clinical analysis, data are commonly utilized to establish mathematical models and carry out classification. High-dimensional clinical data will increase the complexity of classification, which is often utilized in the models, and thus reduce efficiency. The Niche Genetic Algorithm (NGA) is an excellent algorithm for dimensionality reduction. However, in the conventional NGA, the niche distance parameter is set in advance, which prevents it from adjusting to the environment. In this paper, an Improved Niche Genetic Algorithm (INGA) is introduced. It employs a self-adaptive niche-culling operation in the construction of the niche environment to improve the population diversity and prevent local optimal solutions. The INGA was verified in a stratification model for sepsis patients. The results show that, by applying INGA, the feature dimensionality of datasets was reduced from 77 to 10 and that the model achieved an accuracy of 92% in predicting 28-day death in sepsis patients, which is significantly higher than other methods.
机译:随着医学技术的发展,产生越来越多的参数来描述人体的生理状况,形成了高维临床数据集。在临床分析中,通常使用数据来建立数学模型并进行分类。高维临床数据将增加分类的复杂性,而分类的复杂性通常在模型中使用,从而降低了效率。小生境遗传算法(NGA)是一种出色的降维算法。但是,在常规的NGA中,预先设置了利基距离参数,这使其无法适应环境。本文介绍了一种改进的小生境遗传算法(INGA)。它在生态位环境的构建中采用自适应的生态位剔除操作,以改善种群多样性并防止局部最优解。在脓毒症患者的分层模型中验证了INGA。结果表明,通过应用INGA,数据集的特征维数从77减少到10,并且该模型在预测败血症患者28天死亡时的准确率达到92%,明显高于其他方法。

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