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Liver Tumor Segmentation from MR Images Using 3D Fast Marching Algorithm and Single Hidden Layer Feedforward Neural Network

机译:使用3D快速行进算法和单隐藏层前馈神经网络从MR图像进行肝肿瘤分割

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摘要

Objective. Our objective is to develop a computerized scheme for liver tumor segmentation in MR images. Materials and Methods. Our proposed scheme consists of four main stages. Firstly, the region of interest (ROI) image which contains the liver tumor region in the T1-weighted MR image series was extracted by using seed points. The noise in this ROI image was reduced and the boundaries were enhanced. A 3D fast marching algorithm was applied to generate the initial labeled regions which are considered as teacher regions. A single hidden layer feedforward neural network (SLFN), which was trained by a noniterative algorithm, was employed to classify the unlabeled voxels. Finally, the postprocessing stage was applied to extract and refine the liver tumor boundaries. The liver tumors determined by our scheme were compared with those manually traced by a radiologist, used as the “ground truth.” Results. The study was evaluated on two datasets of 25 tumors from 16 patients. The proposed scheme obtained the mean volumetric overlap error of 27.43% and the mean percentage volume error of 15.73%. The mean of the average surface distance, the root mean square surface distance, and the maximal surface distance were 0.58 mm, 1.20 mm, and 6.29 mm, respectively.
机译:目的。我们的目标是为磁共振图像中的肝肿瘤分割开发一种计算机化方案。材料和方法。我们提出的方案包括四个主要阶段。首先,使用种子点提取T1加权MR图像序列中包含肝脏肿瘤区域的感兴趣区域(ROI)图像。减少了该ROI图像中的噪点,并增强了边界。应用3D快速行进算法生成初始标记区域,这些区域被视为教师区域。通过非迭代算法训练的单隐藏层前馈神经网络(SLFN)用于对未标记的体素进行分类。最后,应用后处理阶段来提取和完善肝脏肿瘤边界。将通过我们的方案确定的肝肿瘤与放射科医生手动追踪的肝肿瘤进行比较,以此作为“地面真理”。结果。对来自16位患者的25个肿瘤的两个数据集进行了评估。所提出的方案获得了平均体积重叠误差为27.43%和平均体积百分比误差为15.73%。平均表面距离的平均值,均方根表面距离和最大表面距离分别为0.58mm,1.20mm和6.29mm。

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