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Intraspecific DNA Content Variability in Festuca pallens on Different Geographical Scales and Ploidy Levels

机译:不同地理尺度和倍性水平下羊草种内DNA含量的变异性

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• Background and Aims Intraspecific genome size variability of Festuca pallens occurring on relict rocky steppes in Central Europe was studied on two ploidy levels and three geographical scales: (1) local scale of 24 populations, (2) landscape scale of three transects in river canyons or hill systems, and (3) global scale of 160 samples covering the whole distribution area.• Methods DAPI flow cytometry of homogeneously cultivated samples (≥1 year), measured randomly with two internal standards, Lycopersicon esculentum and Pisum sativum. Differences in DNA content were confirmed (1) by the double peaks of simultaneously measured samples, (2) based on measurements carried out in different seasons, and (3) by additional measurements with propidium iodide.• Key Results On a global scale, the relative DNA content ranged between 1·170-fold in diploids and 1·164-fold in tetraploids. A maximum difference of 1·088-fold between the mean relative DNA content of nearby populations was found. In 16 of 24 populations significant variability was shown (P < 0·001, 1·121-fold as maximum). For both ploidy levels, the relative genome size had the same range and geographical pattern, correlated with geographical coordinates (P < 0·01). Diploids with larger genomes occur on relict habitats (P < 0·01), and in areas of periglacial steppes (20 000 years ago; P < 0·02). In tetraploids, the relative DNA content differs among the three previously recognized geographical types (Alpine, Pannonian and Scabrifolia, P < 0·001). Tetraploids have a relative DNA content smaller than twice that of the diploids (P < 0·001). An influence of microhabitat on DNA content variation was not confirmed.• Conclusions Genome size variability occurs over all spatial scales: intrapopulation, landscape and global. Correlation between geographical coordinates and palaeovegetation type, concomitant with diploids and tetraploids, and no influence of microhabitat were found. Genome size decreases in tetraploids. Lower CVs, and thus higher accuracy, resolution and reproducibility, favour DAPI measurements for the study of intraspecific genome size variability.
机译:•背景和目的在两个倍性水平和三个地理尺度上研究了中欧遗迹岩石草原上的羊茅的种内基因组大小变异:(1)24个种群的局部尺度,(2)河峡谷中三个样貌的景观尺度(3)全球范围内的160个样本覆盖了整个分布区域。方法采用均质栽培样本(Lycopersicon esculentum和Pisum sativum)的两个内部标准,对均质栽培样本(≥1年)进行DAPI流式细胞术。 DNA含量的差异被证实(1)通过同时测量的样品的双峰确定;(2)基于不同季节进行的测量结果;以及(3)通过碘化丙啶进行的其他测量结果。•重要结果在全球范围内,相对DNA含量在二倍体中为1·170倍,在四倍体中为1·164倍。发现附近人群的平均相对DNA含量之间的最大差异为1·088倍。在24个人群中的16个中,显示出显着的变异性(P <0·001,最大1·121倍)。对于两个倍性水平,相对基因组大小具有相同的范围和地理模式,与地理坐标相关(P <0·01)。具有更大基因组的二倍体出现在遗迹栖息地(P <0·01)和冰缘草原地区(20 000 000年前; P <0·02)。在四倍体中,相对DNA含量在三种先前公认的地理类型(高山,潘农氏和弯孢霉菌,P <0·001)之间有所不同。四倍体的相对DNA含量小于二倍体的相对DNA含量(P <0·001)。未确认微生境对DNA含量变化的影响。结论结论基因组大小变异发生在所有空间尺度上:种群内,景观和整体。地理坐标与古植被类型之间的相关性,与二倍体和四倍体同时存在,未发现微生境的影响。四倍体的基因组大小减少。较低的CV(因此具有较高的准确性,分辨率和可重复性)有利于DAPI测量,以研究种内基因组大小变异性。

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