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A Deep Learning Interpretable Model for Novel Coronavirus Disease (COVID-19) Screening with Chest CT Images

机译:具有胸部CT图像的新型冠状病毒疾病(Covid-19)的深层学习可解释模型

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In this article, we propose a convolutional neural network (CNN)-based model, a ResNet-50 based model, for discriminating coronavirus disease 2019 (COVID-19) from Non-COVID-19 using chest CT. We adopted the use of wavelet coefficients of the entire image without cropping any parts of the image as input to the CNN model. One of the main contributions of this study is to implement an algorithm called gradient-weighted class activation mapping to produce a heat map for visually verifying where the CNN model is looking at the image, thereby, ensuring the model is performing correctly. In order to verify the effectiveness and usefulness of the proposed method, we compare the obtained results with that obtained by using pixel values of original images as input to the CNN model. The measures used for performance evaluation include accuracy, sensitivity, specificity, positive predictive value, negative predictive value, F1 score, and Matthews correlation coefficient (MCC). The overall classification accuracy, F1 score, and MCC for the proposed method (using wavelet coefficients as input) were 92.2%, 0.915%, and 0.839%, and those for the compared method (using pixel values of the original image as input) were 88.3%, 0.876%, and 0.766%, respectively. The experiment results demonstrate the superiority of the proposed method. Moreover, as a comprehensible classification model, the interpretability of classification results was introduced. The region of interest extracted by the proposed model was visualized using heat maps and the probability score was also shown. We believe that our proposed method could provide a promising computerized toolkit to help radiologists and serve as a second eye for them to classify COVID-19 in CT scan screening examination.
机译:在本文中,我们提出了一种卷积神经网络(CNN)基础的模型,基于Reset-50的模型,用于使用胸部CT与非Covid-19判断冠状病毒疾病2019(Covid-19)。我们采用了使用整个图像的小波系数而不裁剪图像的任何部分作为CNN模型的输入。本研究的主要贡献之一是实现一种称为梯度加权类激活映射的算法,以产生用于在视觉上验证CNN模型正在寻找图像的热图,从而确保模型正在正确执行。为了验证所提出的方法的有效性和有用性,我们将获得的结果与通过使用原始图像的像素值作为CNN模型的输入进行比较。用于性能评估的措施包括准确性,敏感性,特异性,阳性预测值,否定预测值,F1分数和马修斯相关系数(MCC)。所提出的方法(使用小波系数为输入)的整体分类准确度,F1分数和MCC为92.2%,0.915%和0.839%,以及用于比较方法的方法(使用原始图像的像素值)是88.3%,0.876%和0.766%。实验结果表明了所提出的方法的优越性。此外,作为可理解的分类模型,介绍了分类结果的可解释性。使用热图显示所提出的模型提取的感兴趣区域,并且还显示了概率得分。我们认为,我们的建议方法可以提供有前途的计算机化工具包,帮助放射科医师并作为第二个眼睛,以便在CT扫描筛选检查中对Covid-19进行分类。

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