Institute of Micro/Nano Science and Technology, Shanghai Jiaotong University, Shanghai 200030, China;
Shanghai Center for Bioinformation Technology, Shanghai 200235, China;
College of Life Science and Technology, Shanghai Jiaotong University, Shanghai 200030, China;
Institute of Micro/Nano Science and Technology, Shanghai Jiaotong University, Shanghai 200030, China;
Bioinformation Center of Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200031, China;
cDNA mapping; maximal exact match; enhanced suffix array; pruned fast hash table; extension algorithm;