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The force regulation on binding kinetics and conformations of integrin and selectins using a bio-membrane force probe.

机译:使用生物膜力探针对整联蛋白和选择蛋白的结合动力学和构象进行力调节。

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摘要

Cell adhesion plays an important role in inflammation and immunological responses. Adhesion molecules (e.g., selectins and integrins) are key modulators in mediating these cellular responses. The central theme of this thesis is to investigate the relation between force and kinetics rates and to dissect its mechanism on molecular basis.;In order to study the relation between force, kinetic rates and structural conformational changes, an advanced single molecule instrument, the bio-membrane force probe (BFP), was implemented to explore these fundamental biological questions. This instrument allowed us to measure force-dependent lifetimes of individual molecular bonds with a force sensitivity of ∼1 pN and to detect molecular conformational changes larger than ∼5 nm. We developed a new thermal fluctuation assay to monitor P-, L-selectin and PSGL-1 interactions between two opposing surfaces and to estimate their 2D on-rate and off-rates simultaneously.;Using this new BFP, the relation between force and force history of selectin-ligand interactions was investigated. Based on the sliding rebinding model, the flexibility of L-selectin is an important factor regulating selectin's catch bonds. The lifetimes of bonds between the L-selectin hinge domain mutant (L-selectinN138G) and ligands were measured. The lifetime results showed that increasing the flexibility of the lectin domain by eliminating a hydrogen bond in the inter-domain hinge augmented the bond lifetimes in catch bond regimes. More interestingly, one more slip bond regime was observed in all three selectins at lower forces where previous experiments had never measured. All three selectins exhibited tri-phasic transition of force-dependent off-rates in interacting with their ligands. This tri-phasic transition could further support the sliding rebinding model as this model had predicted that breaking the interactions between the lectin and EGF domains before the lectin domain's pivoting could result in a typical slip bond, as postulated by G. Bell. In addition to regulation of catch bonds by biochemical factors, our results showed that biophysical factors (e.g., force loading rates) could also change the catch bonds' behavior. That is, as loading rates increased, L-selectin-PSGL-1's catch bonds gradually shifted to lower force and were completely converted to slip bonds once force loading rate increased to 104 pN/s. However, catch bonds in L-selectin-6-sulfo-sLex interactions were not changed by these increased loading rates. The mechanism of force loading rating regulation on catch bonds still remains elusive. More deep analysis and experiments are needed to reveal the mechanism.;The BFP was also used to characterize force-dependent lifetimes of LFA-1-ICAM-1 interactions. It has been hypothesized that catch bonds might also exist in LFA-1-ICAM-1 bonds due to the multiple affinity states of LFA-1's ligand binding domain (alphaA domain). The experiments on the bond lifetimes between ICAM-1 and LFA-1 expressed on Jurkat cells showed that LFA-1/ICAM-1 bonds indeed behaved as catch bonds. As a control, the lifetimes of LFA-1 and anti-LFA-1 mAb (KIM127) showed slip bonds. Lifetime distributions of catch bonds revealed a two-state transition, while those of slip bonds did not. More importantly, LFA-1-ICAM-1's catch bonds were abolished by the binding of the small allosteric molecule, XVA143, to LFA-1 and converted to slip bonds. This abolishment provided a structural mechanism for catch bonds in LFA-1-ICAM-1 interactions, that is, the downward movement of alpha7 helix in alphaA domain adjusted the MIDAS in alphaA domain to a high affinity state by mechanical forces; such movement may prolong bond lifetimes in lower force regimes.;Finally, the BFP was applied to dynamically probe the global conformational changes of LFA-1 and to characterize force-regulated transitions among different conformational states on a living cell. Our results showed that dynamic transitions of LFA-1 between extended and bent conformations were probed on living cells by the measurement of force-independent distance changes of the BFP probe beads, by examining the frequencies with which these changes occur (they were modulated by cations, small allosteric molecule, XVA143, and different antibodies (i.e., KIM127 and MEM83)), and by mechanical analysis of LFA-1-ICAM-1 complexes in the above conditions. The observed average distance change of LFA-1's extensions was about 18nm, while that of the contraction was only about 14nm. Finally, our results showed that forces could facilitate extension but they slow down contraction of LFA-1. The observed transition time of extension was =0.1s, while that of contraction was >0.2s. (Abstract shortened by UMI.)
机译:细胞粘附在炎症和免疫反应中起重要作用。粘附分子(例如选择蛋白和整联蛋白)是介导这些细胞反应的关键调节剂。本论文的中心主题是研究力与动力学速率之间的关系,并在分子基础上研究其机理。为了研究力,动力学速率与结构构象变化之间的关系,一种先进的单分子仪器膜力探针(BFP),用于探索这些基本生物学问题。该仪器使我们能够以〜1 pN的力敏感度测量单个分子键的力相关寿命,并检测大于〜5 nm的分子构象变化。我们开发了一种新的热波动测定法,以监测两个相对表面之间的P-,L-选择素和PSGL-1相互作用,并同时估计它们的2D开启率和关闭率。使用这种新的BFP,力与力之间的关系选择蛋白-配体相互作用的历史进行了调查。基于滑动结合模型,L-选择蛋白的柔性是调节选择蛋白的捕获键的重要因素。测量了L-选择蛋白铰链结构域突变体(L-selectinN138G)和配体之间的键的寿命。寿命结果表明,通过消除结构域间铰链中的氢键来增加凝集素结构域的柔韧性,延长了捕获键体系中的键寿命。更有趣的是,在所有三个选择素中都以较低的力观察到了另一种滑动键合机制,而以前的实验从未测量过。在与它们的配体相互作用时,所有三种选择蛋白均显示出力依赖性解离速率的三相转变。这种三相转变可以进一步支持滑动重新结合模型,因为该模型已经预测,在凝集素结构域枢转之前破坏凝集素和EGF结构域之间的相互作用可能会导致典型的滑键(如G. Bell所假设)。我们的研究结果表明,除了受生化因素调节捕获键的作用外,生物物理因素(例如力加载速率)也可能改变捕获键的行为。也就是说,随着加载速率的增加,一旦加载速率提高到104 pN / s,L-选择素-PSGL-1的捕获键逐渐转移到较低的力,并完全转换为滑键。但是,这些增加的加载速率并未改变L-selectin-6-磺基-sLex相互作用中的捕获键。扣押债券上的力负荷等级调节机制仍然难以捉摸。需要更深入的分析和实验以揭示该机理。BFP还用于表征LFA-1-ICAM-1相互作用的受力依赖的寿命。已经假设由于LFA-1的配体结合结构域(αA结构域)的多亲和力状态,在LFA-1-ICAM-1键中也可能存在捕获键。在Jurkat细胞上表达的ICAM-1和LFA-1之间的键寿命的实验表明,LFA-1 / ICAM-1键确实起捕获键的作用。作为对照,LFA-1和抗LFA-1 mAb(KIM127)的寿命表现出滑动键合。捕集债券的终生分布显示出两种状态的转变,而滑动结合的则没有。更重要的是,LFA-1-ICAM-1的捕获键由于小变构分子XVA143与LFA-1的结合而被取消,并转变为滑键。这项废除为LFA-1-ICAM-1相互作用中的捕获键提供了一种结构机制,即alphaA结构域中α7螺旋的向下运动通过机械力将alphaA结构域中的MIDAS调节为高亲和力状态。最后,将BFP用于动态探测LFA-1的整体构象变化,并表征活细胞上不同构象状态之间受力调控的转变。我们的结果表明,通过测量BFP探针珠的不依赖力的距离变化,并通过检查这些变化发生的频率(它们被阳离子调节),可以在活细胞上探查LFA-1在延伸和弯曲构象之间的动态转变。 ,小的变构分子,XVA143和不同的抗体(即KIM127和MEM83),以及在上述条件下对LFA-1-ICAM-1复合物进行机械分析。观察到的LFA-1延伸的平均距离变化约为18nm,而收缩的平均距离变化仅为约14nm。最后,我们的结果表明,力量可以促进扩张,但会减慢LFA-1的收缩。观察到的伸展过渡时间<= 0.1s,而收缩过渡时间> 0.2s。 (摘要由UMI缩短。)

著录项

  • 作者

    Chen, Wei.;

  • 作者单位

    Georgia Institute of Technology.;

  • 授予单位 Georgia Institute of Technology.;
  • 学科 Engineering Biomedical.
  • 学位 Ph.D.
  • 年度 2009
  • 页码 166 p.
  • 总页数 166
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

  • 入库时间 2022-08-17 11:37:50

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