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Microbial Dynamics within Shed Mucosal Secretions of Hirudo verbana, the European Medicinal Leech.

机译:欧洲药用水chHirudo verbana的棚粘膜分泌物中的微生物动力学。

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摘要

Microbes are widespread throughout our planet, residing in soils, oceans, and even beneath the arctic glaciers. Most interact with each other and other life forms, and there is no known complex organism that lacks an associated microbiome. These microbial symbionts are critical to the survival and proliferation of their host by assisting in nutrient provisioning, physiological development, immunological priming, providing protection from pathogens, contributing to predator evasion, etc. As such, the transmission of these symbionts is a crucial aspect of host biology. Despite a growing appreciation for the prevalence of mixed transmission (incorporating vertical, or from a parental route, and horizontal, or environmental, mechanisms) for establishing microbial symbioses, features that enable these infections are not well understood. My work investigated the mechanistic basis of symbiont acquisition by the European medicinal leech, Hirudo verbana. In the leech cocoon, only a portion of the albumenotrophic larvae obtain their beneficial gut symbiont, the Gammaproteobacterium Aeromonas veronii. However, by early adulthood, all leeches harbor this bacterium, indicating the complementation of incomplete vertical transmission by an unknown horizontal mechanism. Insight from a number of other organisms, aquatic and terrestrial, suggests that host-secreted mucus may provide a transmission vehicle. Through the use of genetically-tractable A. veronii, I demonstrated that cyclical host mucosal secretions are seeded by digestive tract symbionts. Using quantitative PCR, I verified that A. veronii are not only viable, but also proliferate within mucosal casts at a frequency synchronous to host shedding. Subsequent experiments using mucus inoculated with a gfp-expressing A. veronii demonstrates that mucosal contact is sufficient for symbiont transmission to novel hosts. Importantly, behavior assays show that leeches are attracted to these castings, providing an efficient mechanism for transmission of A. veronii between conspecifics. Additional behavioral assays show that host symbiont-state does not influence attraction towards mucus and that symbiont content of the mucus does not alter attraction, suggesting that A. veronii exploits a preexisting host physiological process.;Lastly, Illumina-based RNA-seq was used to identify how the A. veronii transcriptome, with regards to metabolism and information processing, responds to the lifestyle shift from mutualistic within the leech digestive tract to free-living within shed mucus. This dual mode of symbiont transmission may prove evolutionarily advantageous, as it not only ensures the infection of leeches by beneficial symbionts, but also provides accessibility to a higher genetic diversity of symbionts and biome lifestyle options to A. veronii beyond that of mutualism. Additionally, examination of the composition of the mucosal microbial community utilizing two separate culture-independent sequencing techniques (i.e. Sanger-sequenced 16S rRNA clone libraries and Illumina deep-sequencing of the V3-V4 hypervariable region of the 16S rRNA gene) revealed that a diverse microbiota resides within the mucus, consisting of both previously-described and potentially novel leech symbionts. Additional transcriptomic analyses indicate that this microbial community actively engages in cell-to-cell communication via quorum sensing and potential DNA transfer. In depth genomic analyses also prove that a novel microbial species, Pedobacter, is a major mucosal microbiota member worthy of future study. Understanding the features that enable mixed transmission, particularly those involving mixed species assemblages, may prove instrumental for the development of strategies to promote beneficial symbioses.
机译:微生物遍布地球,海洋,甚至存在于北极冰川之下。大多数生物相互影响,并与其他生命形式相互作用,并且没有已知的复杂生物缺乏相关的微生物组。这些微生物共生体通过协助营养供应,生理发育,免疫引发,提供对病原体的保护,有助于逃避捕食者逃逸等对它们的宿主的存活和增殖至关重要,因此,这些共生体的传播是人类重要的方面。宿主生物学。尽管人们越来越意识到建立微生物共生体的混合传播(结合垂直传播或来自父母的途径,以及水平传播或环境传播的机制)的普遍性,但对导致这些感染的特征仍知之甚少。我的工作调查了欧洲药用水echHirudo verbana对共生体获取的机制基础。在水ech茧中,只有一部分蛋白营养缺乏的幼虫获得了有益的肠道共生体,即γ变形杆菌Aeromonas veronii。然而,到成年早期,所有水lee都携带这种细菌,表明未知水平机制对垂直传播的补充。来自许多其他水生和陆地生物的见解表明,宿主分泌的粘液可能提供了传播媒介。通过使用可遗传处理的拟南芥,我证明了周期性宿主粘膜分泌物是由消化道共生菌播种的。使用定量PCR,我证实了维氏假单胞菌不仅可行,而且还可以在黏膜模型中以与宿主脱落同步的频率增殖。随后的实验使用了接种有表达gfp的拟南芥的粘液,表明粘膜接触足以将共生体传播到新型宿主。重要的是,行为分析表明,水are被这些铸件吸引,为在种间传播A. veronii提供了有效的机制。额外的行为分析表明,宿主共生体状态不会影响对粘液的吸引力,并且粘液中的共生体含量不会改变吸引力,这表明维氏假单胞菌利用了预先存在的宿主生理过程。最后,使用了基于Illumina的RNA-seq确定关于代谢和信息处理的Veronii A. veronii转录组如何应对生活方式的转变,从水mutual消化道内的相互关系转变为脱落的粘液内的自由生活。这种共生体传播的双重模式可能在进化上被证明是有利的,因为它不仅确保有益的共生体感染了水mutual,而且还为共生菌提供了更高的共生性遗传多样性和超越互惠的生物群系生活方式选择。此外,利用两种独立的与文化无关的测序技术(即,桑格测序的16S rRNA克隆文库和16S rRNA基因的V3-V4高变区的Illumina深度测序)检查了粘膜微生物群落的组成,结果发现微生物群位于粘液中,由先前描述的和潜在的新型水ech共生体组成。附加的转录组分析表明,该微生物群落通过群体感应和潜在的DNA转移积极参与了细胞间的通讯。深入的基因组分析还证明,一种新的微生物物种Pedobacter是粘膜微生物群的主要成员,值得进一步研究。了解使混合传播成为可能的特征,尤其是涉及混合物种组合的特征,可能有助于发展促进有益共生的策略。

著录项

  • 作者

    Ott, Brittany Maree.;

  • 作者单位

    West Virginia University.;

  • 授予单位 West Virginia University.;
  • 学科 Biology.;Microbiology.;Evolution development.
  • 学位 Ph.D.
  • 年度 2016
  • 页码 207 p.
  • 总页数 207
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

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