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Polymers as Heterogeneous Growth Promoters for Protein Crystallization.

机译:聚合物作为蛋白质结晶的异质生长促进剂。

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摘要

Obtaining suitable single crystals for X-ray diffraction remains a major bottleneck in the structural characterization of new compounds. Nowhere is this more apparent than in structural biology where the challenges of crystal growth are considerable. In cases where traditional growth methods fail to yield suitable protein crystals, the target is often reconsidered, rather than the crystallization approach. In the studies described in this thesis, polymer-induced heteronucleation (PIHn), a powerful technique well-established in the realm of small molecule crystallization, is tailored to meet the challenges inherent to protein crystallization.;Based on the premise that polymers designed for small molecule crystallization may not be best suited to facilitating biomolecule crystallization in PIHn, the heteronucleant composition in PIHn was modified by introducing less hydrophobic crosslinking agents, which led to increased crystal size and new form access. The polymers were additionally redeployed in a variety of formats suitable for sitting and hanging-drop vapor diffusion crystallizations. The power and utility of these advances was demonstrated through the application of PIHn to bovine liver catalase (BLC) and concanavalin A (conA). For BLC, this approach led to increased crystal size and ultimately the first X-ray crystal structure of a crystal form of BLC that was previously too small for structural characterization. Additionally, in the presence of the heteronucleants two novel forms of conA were discovered and analyzed using single crystal X-ray diffraction.;Forming single crystals does not ensure structural characterization. Crystal harvesting often leads to crystal damage for delicate protein crystals, which can be amplified when using PIHn due to the propensity for crystals to adhere to the heteronucleants. This led to a growth strategy to allow nucleation on crystal mounts coated with polymer heteronuclei. In order to achieve selective control of nucleation, the surface chemistry of the crystal mount was modified using different heteronuclei. This method successfully controlled crystal growth for conA and BLC. A conA crystal grown directly on the crystal mount was characterized using X-ray diffraction, illustrating that the quality of the crystal was not negatively impacted by the presence of the functionalized crystal mount.
机译:获得适用于X射线衍射的单晶仍然是新化合物结构表征的主要瓶颈。在晶体生物学面临巨大挑战的结构生物学中,这是最明显的。在传统的生长方法无法产生合适的蛋白质晶体的情况下,通常会重新考虑靶标,而不是结晶方法。在本文描述的研究中,聚合物诱导的异核(PIHn)是一种在小分子结晶领域中广泛建立的强大技术,旨在应对蛋白质结晶固有的挑战。小分子结晶可能并不最适合于促进PIHn中生物分子的结晶,通过引入较少的疏水性交联剂对PIHn中的异核清洁剂成分进行了改性,这导致了晶体尺寸的增加和新形式的获得。另外,将聚合物以适合于坐滴和悬滴蒸气扩散结晶的多种形式重新部署。通过将PIHn应用于牛肝过氧化氢酶(BLC)和伴刀豆球蛋白A(conA),证明了这些进步的力量和实用性。对于BLC,此方法导致晶体尺寸增加,并最终导致BLC晶体形式的第一个X射线晶体结构,该结构以前太小而无法进行结构表征。此外,在存在异核剂的情况下,发现了两种新型conA,并使用单晶X射线衍射进行了分析。形成单晶不能确保结构表征。晶体收获通常会导致脆弱的蛋白质晶体受到晶体破坏,使用PIHn时,由于晶体倾向于附着在异核剂上,晶体损伤会被放大。这导致了一种生长策略,允许在涂覆有聚合物异核的晶体支架上成核。为了实现成核的选择性控制,使用不同的杂核对晶体底座的表面化学进行了修饰。此方法成功控制了conA和BLC的晶体生长。使用X射线衍射对直接生长在晶体底座上的conA晶体进行了表征,这表明功能化晶体底座的存在不会对晶体质量产生负面影响。

著录项

  • 作者

    Foroughi, Leila M.;

  • 作者单位

    University of Michigan.;

  • 授予单位 University of Michigan.;
  • 学科 Chemistry Biochemistry.;Chemistry Polymer.
  • 学位 Ph.D.
  • 年度 2012
  • 页码 144 p.
  • 总页数 144
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

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