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Studies in Cryptosporidium: Maintenance of stable populations through in vivo propogation and molecular detection strategies.

机译:隐孢子虫的研究:通过体内繁殖和分子检测策略维持稳定种群。

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Cryptosporidiosis, an infection caused by several genotypically and phenotypically diverse Cryptosporidium species, is a serious enteric disease of animals and humans worldwide. The current understanding of cryptosporidiosis, transmission, diagnosis, treatment and prevention measures for this disease is discussed. Contaminated water represents the major source of Cryptosporidium infections for humans. Manure from cattle can be a major source of Cryptosporidium oocysts. Oocysts transport to surface water can occur through direct fecal contamination, surface transport from land-applied manure or leaching through the soil to groundwater. Identification of Cryptosporidium species and genotypes facilitates determining the origin of the oocysts and to recognize sources of infection in outbreak situations and the risk factors associated with transmission. Very few studies have applied isolation methods to field samples because of difficulties with detection of oocysts in environmental samples. The objective of this study was to develop an easy method that can be applied to field samples to rapidly detect the presence of Cryptosporidium oocysts and identify their species. A molecular detection system that included an oocyst recovery method combined with spin column DNA extraction, followed by PCR-hybridization for detection and a Real-Time PCR-melting curve analysis for species assignment. Due to its versatility and capability of rapid high-throughput analysis of multiple targets, an oligonucleotide microarray was also designed to identify Cryptosporidium parasites and discriminate between species. The detection assay was then used to assess Cryptosporidium contamination in swine and poultry samples and to study the transport of Cryptosporidium oocysts through disturbed (tilled) and nondisturbed (no-till) soil during simulated rainfall. The results of the study demonstrated the potential of the assay for the detection of the parasite in environmental samples.; In vitro cultivation systems that permit Cryptosporidium development and propagation are still under development; therefore clonal reference strains are not available. Using micromanipulation, single-cell clones of C. hominis were derived and maintained in a gnotobiotic pig model. Genetic stability of each subsequent generation was monitored through microsatellite fingerprinting and sequence analysis. The results indicated that these single oocyst derivatives led to the expansion and maintenance of genetically and phenotypically homogeneous populations.
机译:隐孢子虫病是由几种基因型和表型不同的隐孢子虫物种引起的感染,是全世界范围内动物和人类的严重肠病。讨论了目前对该病隐孢子虫病的认识,传播,诊断,治疗和预防措施。被污染的水是人类隐孢子虫感染的主要来源。牛粪可能是隐孢子虫卵囊的主要来源。卵囊向地表水的运输可通过直接粪便污染,从土地施用的粪便进行地表运输或通过土壤淋溶至地下水来实现。隐孢子虫种类和基因型的鉴定有助于确定卵囊的起源,并有助于识别暴发情况下的感染源以及与传播有关的危险因素。由于很难检测环境样品中的卵囊,因此很少有研究将分离方法应用于田间样品。这项研究的目的是开发一种简单的方法,该方法可用于野外样品,以快速检测隐孢子虫卵囊的存在并鉴定其种类。一种分子检测系统,包括卵囊回收法与旋转柱DNA提取相结合,然后进行PCR杂交检测和物种分配的实时PCR熔解曲线分析。由于其多功能性和对多个靶标进行快速高通量分析的能力,还设计了寡核苷酸微阵列来鉴定隐孢子虫寄生虫并区分物种。然后,将检测测定法用于评估猪和家禽样品中隐孢子虫的污染,并研究隐孢子虫卵在模拟降雨过程中通过扰动(倾斜)和未扰动(免耕)土壤的运输。研究结果证明了该检测方法有可能检测环境样品中的寄生虫。允许隐孢子虫发育和繁殖的体外培养系统仍在开发中。因此无克隆参考菌株。使用显微操作,衍生出人形衣原体的单细胞克隆,并将其维持在生猪模型中。通过微卫星指纹图谱和序列分析监测每个后代的遗传稳定性。结果表明,这些单一的卵囊衍生物导致遗传和表型同质种群的扩大和维持。

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