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Improved mathematical and computational tools for modeling photon propagation in tissue.

机译:用于建模光子在组织中传播的改进的数学和计算工具。

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摘要

Light interacts with biological tissue through two predominant mechanisms: scattering and absorption, which are sensitive to the size and density of cellular organelles, and to biochemical composition (ex. hemoglobin), respectively. During the progression of disease, tissues undergo a predictable set of changes in cell morphology and vascularization, which directly affect their scattering and absorption properties. Hence, quantification of these optical property differences can be used to identify the physiological biomarkers of disease with interest often focused on cancer.;Diffuse reflectance spectroscopy is a diagnostic tool, wherein broadband visible light is transmitted through a fiber optic probe into a turbid medium, and after propagating through the sample, a fraction of the light is collected at the surface as reflectance. The measured reflectance spectrum can be analyzed with appropriate mathematical models to extract the optical properties of the tissue, and from these, a set of physiological properties. A number of models have been developed for this purpose using a variety of approaches -- from diffusion theory, to computational simulations, and empirical observations. However, these models are generally limited to narrow ranges of tissue and probe geometries.;In this thesis, reflectance models were developed for a much wider range of measurement parameters, and influences such as the scattering phase function and probe design were investigated rigorously for the first time. The results provide a comprehensive understanding of the factors that influence reflectance, with novel insights that, in some cases, challenge current assumptions in the field. An improved Monte Carlo simulation program, designed to run on a graphics processing unit (GPU), was built to simulate the data used in the development of the reflectance models. Rigorous error analysis was performed to identify how inaccuracies in modeling assumptions can be expected to affect the accuracy of extracted optical property values from experimentally-acquired reflectance spectra. From this analysis, probe geometries that offer the best robustness against error in estimation of physiological properties from tissue, are presented. Finally, several in vivo studies demonstrating the use of reflectance spectroscopy for both research and clinical applications are presented.
机译:光通过两个主要机制与生物组织相互作用:散射和吸收,它们分别对细胞器的大小和密度以及生化成分(例如血红蛋白)敏感。在疾病进展期间,组织会发生一系列可预测的细胞形态和血管形成变化,这直接影响其散射和吸收特性。因此,这些光学性质差异的量化可用于识别通常关注于癌症的疾病的生理生物标记。漫反射光谱法是一种诊断工具,其中宽带可见光通过光纤探头传输到混浊介质中,在样品中传播后,一部分光被收集在表面作为反射率。可以使用适当的数学模型来分析测得的反射光谱,以提取组织的光学特性,并从中提取出一组生理特性。为此,已经使用多种方法开发了许多模型-从扩散理论到计算模拟和经验观察。但是,这些模型通常仅限于组织和探针几何形状的狭窄范围。在本论文中,开发了适用于更大范围测量参数的反射模型,并针对散射相位函数和探针设计等因素进行了严格研究。第一次。结果提供了对影响反射率的因素的全面理解,并以新颖的见解在某些情况下挑战了该领域的当前假设。设计了一种改进的蒙特卡洛模拟程序,该程序设计为在图形处理单元(GPU)上运行,以模拟反射模型开发中使用的数据。进行了严格的误差分析,以识别建模假设中的不准确性如何影响从实验获得的反射光谱中提取的光学特性值的准确性。通过该分析,提出了在对来自组织的生理特性进行估计时提供最佳抗误差能力的探针几何形状。最后,提出了几项体内研究证明了反射光谱在研究和临床应用中的使用。

著录项

  • 作者

    Calabro, Katherine Weaver.;

  • 作者单位

    Boston University.;

  • 授予单位 Boston University.;
  • 学科 Biophysics General.;Physics Optics.;Engineering Biomedical.
  • 学位 Ph.D.
  • 年度 2013
  • 页码 272 p.
  • 总页数 272
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

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