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Identification and expression of invertase genes in Populus.

机译:杨树中转化酶基因的鉴定和表达。

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摘要

Invertase (EC 3.2.1.26) plays a key role in carbon utilization as it catalyzes the irreversible hydrolysis of sucrose into glucose and fructose. These sugars can act as both metabolic fuel and as signaling compounds directly affecting resource allocation in the plant and indirectly influencing the expression of genes responsive to shifts in hexose and sucrose availability. The invertase family in plants is composed of two sub-families thought to have distinct evolutionary origins and can be distinguished by their pH optima for activity: acid invertases and neutral/alkaline invertases. The acid invertases apparently originated in eubacteria and are targeted to the cell wall and vacuole, while neutral/alkaline invertases apparently originated in cyanobacteria and function in the cytosol. The recently sequenced genome of Populus trichocharpa (Torr. & Gray) allowed us to identify the genes encoding invertase in this woody perennial. Here we describe the identification of eight acid invertase genes; three of which belong to the vacuolar targeted group (PtVIN1-3), and five of which belong to the cell wall targeted group (PtCIN1-5). Similarly, we report the identification of 16 neutral/alkaline invertase genes (PtNIN1-16). Expression analyses using whole genome microarrays and RT-PCR reveal evidence for expression of all invertase family members. An examination of the microsyntenic regions surrounding the poplar invertase genes reveals extensive colinearity with Arabidopsis invertases. We also find evidence for expression of a novel intronless vacuolar invertase (PtVIN1), which apparently arose from a processed PtVIN2 transcript that re-inserted into the genome. To our knowledge, this is the first intronless invertase found in plants. The response of two poplar vacuolar invertases ( PtVIN2 and -3) to exogenous sugar treatments was examined and compared to those of the Arabidopsis, maize and rice vacuolar invertase orthologs. We found that PtVIN2 and -3 exhibit a reciprocal response to both light and exogenous sugar treatments whereby PtVIN2 expression is repressed under both light and high sugar conditions while PtVIN3 is induced under the same conditions. This reciprocal response has been previously documented in other plant systems including Arabidopsis, maize and rice. An examination of the microsyntenic chromosomal regions containing vacuolar invertase reveals extensive colinearity between Arabidopsis and poplar, but does not include rice and maize. The conserved colinear structure of the chromosomal segments containing the vacuolar invertases in Arabidopsis and poplar, coupled with the conserved reciprocal responses of these vacuolar invertases to sugar in Arabidopsis, poplar, maize and rice, has led to the hypothesis that the reciprocal nature of this sugar response arose in an ancient genome duplication event that occurred prior to the monocot and eudicot divergence on the evolutionary tree. To better understand the role of invertase in sucrose export and sink development, yeast invertase (SUC2) was ectopically expressed in a Populus tremula x P. alba hybrid. Despite the efficacy of this transgenic approach in other plant systems resulting in whole-plant shifts in carbon allocation and dramatic changes in sugar accumulation; transgenic poplars showed no whole-plant carbon allocation shifts. Metabolic analyses revealed that while most of the transgenic poplar lines did not exhibit the expected alterations in sugar accumulation, intermediates in the glyoxylate and the tricarboxylic acid cycles did fluctuate relative to the non-transgenic controls.
机译:转化酶(EC 3.2.1.26)在碳利用中起关键作用,因为它催化蔗糖不可逆地水解为葡萄糖和果糖。这些糖既可以作为代谢燃料,又可以作为信号传导化合物,直接影响植物中的资源分配,并间接影响响应于己糖和蔗糖利用率变化的基因表达。植物中的转化酶家族由两个亚家族组成,它们被认为具有不同的进化起源,可以通过其活性的最适pH值加以区分:酸性转化酶和中性/碱性转化酶。酸性转化酶显然起源于真细菌,并靶向细胞壁和液泡,而中性/碱性转化酶显然起源于蓝细菌并在细胞质中起作用。最近测序的胡杨(Populus trichocharpa)基因组(Torr。&Gray)使我们能够鉴定该多年生木质植物中编码转化酶的基因。在这里,我们描述了八个酸性转化酶基因的鉴定。其中三个属于液泡靶向组(PtVIN1-3),其中五个属于细胞壁靶向组(PtCIN1-5)。同样,我们报告了16个中性/碱性转化酶基因(PtNIN1-16)的鉴定。使用全基因组微阵列和RT-PCR的表达分析揭示了所有转化酶家族成员表达的证据。杨树转化酶基因周围的微突区域的检查显示与拟南芥转化酶具有广泛的共线性。我们还发现了新型无内含液泡转化酶(PtVIN1)的表达证据,该酶显然是由重新插入基因组中的经过处理的PtVIN2转录物引起的。据我们所知,这是在植物中发现的第一个无内含子转化酶。检查了两个杨液泡转化酶(PtVIN2和-3)对外源糖处理的反应,并将其与拟南芥,玉米和水稻液泡转化酶直向同源物的反应进行了比较。我们发现PtVIN2和-3对轻糖和外源糖处理均表现出相互反应,从而在轻糖和高糖条件下PtVIN2的表达均受到抑制,而在相同条件下诱导PtVIN3。这种相互反应先前已在其他植物系统(包括拟南芥,玉米和水稻)中得到记录。对含有液泡转化酶的微同染色体区域的检查显示,拟南芥和杨树之间存在广泛的共线性,但不包括水稻和玉米。拟南芥和杨树中含有液泡转化酶的染色体节段的保守共线结构,再加上拟南芥,杨树,玉米和水稻中这些液泡转化酶对糖的保守互作,导致了以下假设:该糖具有互逆性在进化树上的单子叶植物和双子叶植物发散之前发生的古老基因组复制事件中引起了应答。为了更好地了解转化酶在蔗糖出口和水槽发育中的作用,酵母转化酶(SUC2)在白杨与白杨假单胞菌杂种中异位表达。尽管这种转基因方法在其他植物系统中有效,但会导致整个植物的碳分配发生变化,糖分积累发生显着变化;转基因杨树没有表现出全植物碳分配的变化。代谢分析显示,尽管大多数转基因杨树品系并未表现出预期的糖积累变化,但乙醛酸酯和三羧酸循环的中间体相对于非转基因对照确实有所波动。

著录项

  • 作者

    Bocock, Philip N.;

  • 作者单位

    University of Florida.;

  • 授予单位 University of Florida.;
  • 学科 Biology Genetics.
  • 学位 Ph.D.
  • 年度 2007
  • 页码 149 p.
  • 总页数 149
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 遗传学;
  • 关键词

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