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A molecular and morphological investigation of the red seaweed genus Porphyra (Bangiales, Rhodophyta) in the northwest Atlantic.

机译:西北大西洋红藻紫菜属(Bangiales,Rhodophyta)的分子和形态学研究。

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摘要

To evaluate the possible occurrence of cryptic Porphyra taxa in the Northwest Atlantic, extensive field collections were made during winter and spring periods when relatively few previous collections had been made. Approximately 100 different sites extending from Chance Harbor, New Brunswick, Canada to Rye, New York, USA, were sampled during multiple years (2001-2005). Historical specimens from several herbaria (NHA, FH, BM, WTU, MICH, US) were also examined for possible cryptic taxa. A combination of morphological and molecular tools was used to screen both recent and historical collections.; Sequences from the plastid-encoded, ribulose-1, 5-bisphosphate carboxylase-oxygenase large subunit (rbcL) gene and rbcL- rbcS spacer, the nuclear ribosomal small subunit (SSU), and internal transcribed spacer 1 (ITS1) regions were compared with other Porphyra taxa sequences available on GenBank. Sequences from four taxa were found to match Pacific taxa, with three of these having not been previously reported for the Northwest Atlantic (i.e. P. rediviva Stiller & Waaland, P. yezoensis f. narawaensis Miura, P. katadae Miura). In addition, five previously undescribed taxa, with unique rbcL, SSU, and ITS1 sequences were discovered.; Porphyra rediviva, which was previously described from the Pacific, could not be morphologically or ecologically distinguished from P. purpurea (Roth) C. Agardh. Additionally, the rbcL and ITS1 sequences from the nomenclatural type specimens of both species were identical, providing compelling evidence for the synonymization of P. rediviva under the older named taxon, P. purpurea. As there was an equal amount of molecular variation within both the Atlantic and Pacific populations of P. purpurea, the designation of a parent population was unclear. With this synonym, the number of known monostromatic species occurring in the Northwest Atlantic having male/female gametangia on separate longitudinal "halves" of the blade includes P. purpurea, P. birdiae, and P. katadae. While molecular differences among these three species are distinct, morphological and ecological features are less clear. However, differences between these taxa are more apparent if combinations of both morphological and ecological characteristics are used. For example, by combining blade thickness and color, P. katadae can be delineated from both P. purpurea and P. birdiae , while a comparison of distributional patterns show a clear distinction between more northern P. birdiae and southern P. katadae.; Despite the recent report of Porphyra yezoensis f. yezoensis from a single site in New Hampshire, USA, molecular screenings of specimens from across the region provides strong evidence of a once continuous distribution from mid-Maine to western Long Island Sound. In addition to the populations of P. yezoensis f. yezoensis in New England, three populations of this taxon were found on the Gulf Coast of Texas, with one specimen dating back to the late 1960's. When comparisons of ITS1 sequences were made with Asian individuals, all New England specimens plus one Texas specimen had identical sequences to Japanese specimens, while the other two Texas populations showed a closer affinity to Chinese populations. Thus, the molecular evidence supports at least two introductions of P. yezoensis f. yezoensis to the Gulf Coast of Texas. The discovery of a second Asiatic cultivar, P. yezoensis f. narawaensis, in New England appears to be of more recent introduction than the established f. yezoensis as documented by its later development (1980's) and more circumscribed distribution that interrupts the continuous distribution of P. yezoensis f. yezoensis.; The ITS1 sequences of New England Porphyra yezoensis f. narawaensis populations show no variation and they are identical to as many as 16 commercial strains in Japan. Similarly, the distribution of another Asiatic species discovered in New England, P. katadae, is circumscribed, and it appears to be a recent i
机译:为了评估西北大西洋可能存在隐性紫菜类群,在冬季和春季期间进行了广泛的田间采集,而以前的采集很少。在多年(2001-2005年)期间,从加拿大新不伦瑞克的Chance Harbor到美国纽约的Rye约有100个不同的采样点。还检查了几种草本植物(NHA,FH,BM,WTU,MICH,US)的历史标本,以寻找可能的隐性分类群。形态学和分子工具的组合被用来筛选最近和历史的藏书。将质体编码的核糖-1、5-双磷酸羧化酶加氧酶大亚基(rbcL)基因和rbcL-rbcS间隔子,核糖体小亚基(SSU)和内部转录间隔子1(ITS1)区域的序列与GenBank上的其他紫菜类群序列。发现来自四个分类单元的序列与太平洋分类单元匹配,其中三个尚未在西北大西洋上报道过(即P. rediviva Stiller&Waaland,P. yezoensis f。narawaensis Miura,P. katadae Miura)。此外,还发现了五个以前未描述的类群,它们具有独特的rbcL,SSU和ITS1序列。以前从太平洋描述过的紫菜(Porphyra rediviva)在形态上或生态学上都不能与紫苏(R.)C. Agardh区分。此外,两个物种的命名法样本的rbcL和ITS1序列是相同的,这为在较旧命名的紫杉(P. purpurea)下的紫叶苜蓿(P. rediviva)的同义词提供了有力的证据。由于在大西洋和太平洋紫斑病菌种群中存在相同数量的分子变异,因此尚不清楚亲本种群的名称。有了这个同义词,在西北大西洋上出现的已知单层物种的数量在叶片的单独的纵向“两半”上具有雄/雌配子体,包括紫癜疫霉,小鸟疫霉和片状疟疾。虽然这三个物种之间的分子差异是明显的,但其形态和生态特征尚不清楚。但是,如果同时使用形态和生态特征,则这些分类单元之间的差异会更加明显。例如,通过结合叶片的厚度和颜色,既可以从P. purpurea和P. birdiae划出片假单胞菌,而对分布模式的比较则可以看出北部的P. birdiae和南部的片假单胞菌有明显的区别。尽管最近有紫菜卟啉的报告。 yezoensis来自美国新罕布什尔州的一个地点,对整个地区的标本进行分子筛查提供了有力的证据,证明从缅因州中部到西部长岛峡曾经是连续分布的。除了yezoensis f。在新英格兰的yezoensis中,在得克萨斯州墨西哥湾沿岸发现了3个这种分类单元,其中一个标本可以追溯到1960年代后期。当将ITS1序列与亚洲人进行比较时,所有新英格兰标本加上一个德克萨斯州标本与日本标本具有相同的序列,而其他两个德克萨斯州人群显示出与中国人群更接近的亲和力。因此,分子证据支持至少两次引入野牛假单胞菌。 yezoensis至得克萨斯州墨西哥湾沿岸。发现了第二个亚洲品种,P。yezoensis f。在新英格兰的那拉瓦斯(narawaensis)似乎比已建立的f。 yezoensis的后期发展(1980年代)和更加局限的分布证明了yezoensis f。的连续分布。 yezoensis。新英格兰野紫菜的ITS1序列。 narawaensis种群没有变化,与日本多达16种商业菌株相同。同样,在新英格兰发现的另一种亚洲物种片假单胞菌P. katadae的分布也受到限制,这似乎是最近的一种。

著录项

  • 作者

    Bray, Troy Lee.;

  • 作者单位

    University of New Hampshire.;

  • 授予单位 University of New Hampshire.;
  • 学科 Biology Molecular.; Biology Botany.; Biology Oceanography.
  • 学位 Ph.D.
  • 年度 2006
  • 页码 165 p.
  • 总页数 165
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 分子遗传学;植物学;海洋生物;
  • 关键词

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