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Iterative Reconstruction for Bioluminescence Tomography with Total Variation Regularization

机译:具有总变化正则化的生物发光层析成像的迭代重建。

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Bioluminescence tomography(BLT) is an instrumental molecular imaging modality designed for the 3D location and quantification of bioluminescent sources distribution in vivo. In our context, the diffusion approximation(DA) to radiative transfer equation(RTE) is utilized to model the forward process of light propagation. Mathematically, the solution uniqueness does not hold for DA-based BLT which is an inverse source problem of partial differential equations and hence is highly ill-posed. In the current work, we concentrate on a general regulariza-tion framework for BLT with Bregman distance as data fidelity and total variation(TV) as regularization. Two specializations of the Bregman distance, the least squares(LS) distance and Kullback-Leibler(KL) divergence, which correspond to the Gaussian and Poisson environments respectively, are demonstrated and the resulting regularization problems are denoted as LS+TV and KL+TV. Based on the constrained Landweber(CL) scheme and expectation maximization(EM) algorithm for BLT, iterative algorithms for the LS+TV and KL+TV problems in the context of BLT are developed, which are denoted as CL-TV and EM-TV respectively. They are both essentially gradient-based algorithms alternatingly performing the standard CL or EM iteration step and the TV correction step which requires the solution of a weighted ROF model. Chambolle's duality-based approach is adapted and extended to solving the weighted ROF subproblem. Numerical experiments for a 3D heterogeneous mouse phantom are carried out and preliminary results are reported to verify and evaluate the proposed algorithms. It is found that for piecewise-constant sources both CL-TV and EM-TV outperform the conventional CL and EM algorithms for BLT.
机译:生物发光体层摄影术(BLT)是一种仪器化的分子成像方法,旨在用于体内生物发光源分布的3D定位和量化。在我们的上下文中,对辐射传递方程(RTE)的扩散近似(DA)用于模拟光传播的正向过程。在数学上,解决方案的唯一性不适用于基于DA的BLT,这是偏微分方程的反源问题,因此病态严重。在当前的工作中,我们专注于BLT的一般正则化框架,其中Bregman距离作为数据保真度,而总变异数(TV)作为正则化。证明了分别对应于高斯和泊松环境的Bregman距离的两个专业化,最小二乘(LS)距离和Kullback-Leibler(KL)散度,并将由此产生的正则化问题表示为LS + TV和KL + TV 。基于约束的Landweber(CL)方案和BLT的期望最大化(EM)算法,针对BLT上下文中的LS + TV和KL + TV问题,开发了迭代算法,分别称为CL-TV和EM-TV。分别。它们都是基于梯度的算法,交替执行标准CL或EM迭代步骤和TV校正步骤,这需要加权ROF模型的求解。 Chambolle基于对偶性的方法经过修改并扩展为解决加权ROF子问题。进行了3D异构鼠标体模的数值实验,并报告了初步结果以验证和评估所提出的算法。发现对于分段恒定源,CL-TV和EM-TV均优于BLT的常规CL和EM算法。

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