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Deep Learning Angiography (DLA): Three-dimensional C-arm cone beam CT angiography generated from deep learning method using a convolutional neural network

机译:深度学习血管造影(DLA):使用卷积神经网络的深度学习方法产生的三维C臂锥梁CT血管造影

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Current clinical 3D-DSA requires the acquisition of two image volumes, before and after the injection of contrast media (i.e. mask and fill scans). Deep learning angiography (DLA) is a recently developed technique that enables the generation of mask-free 3D angiography using convolutional neural networks (CNN). In this work, the quantitative performance of DLA as a function of the number of layers in the deep neural network and the DLA inference computation time are investigated. Clinically indicated rotational angiography exams of 105 patients scanned with a C-arm conebeam CT system using a standard 3D-DSA imaging protocol for the assessment of cerebrovascular abnormalities were retrospectively collected. More than 185 million labeled voxels from contrast-enhanced images of 43 subjects were used as training and testing dataset. Multiple deep CNNs were trained to perform DLA. The trained DLA models were then applied in a validation cohort consisting of the remaining image volumes from 62 subjects and accuracy, sensitivity, precision and F1-scores were calculated for vasculature classification in relevant anatomy. The implementation of the best performing model was optimized for accelerated DLA inference and the computation time was measured under multiple hardware configurations. Vasculature classification accuracy and 95% CI in the validation dataset were 98.7% ([98.3, 99.1] %) for the best performing model. DLA inference user time was 17 seconds for a throughput of 23 images/s. In conclusion, a 30-layer DLA model outperformed shallower networks and DLA inference computation time was demonstrated not be a limiting factor for current clinical practice.
机译:目前的临床3D-DSA需要采集两种图像体积,在注射造影剂(即掩模和填充扫描)之前和之后。深度学习血管造影(DLA)是最近开发的技术,可以使用卷积神经网络(CNN)产生无面具的3D血管造影。在这项工作中,研究了DLA的定量性能作为深神经网络中的层数和DLA推理计算时间的层数。回顾性地收集了使用标准3D-DSA成像协议扫描的105名患者的临床表明旋转血管造影考试,用于评估脑血管异常的标准3D-DSA成像协议。从对比度增强的43个受试者图像的超过185万标记的体素被用作培训和测试数据集。培训多个深CNN以执行DLA。然后将培训的DLA模型应用于验证队列,该核队列组成的剩余图像体积,从62个受试者和准确性,灵敏度,精度和F1分数计算出相关解剖学中的血管系统分类。为加速DLA推理进行了优化了最佳执行模型的实现,并且在多个硬件配置下测量计算时间。验证数据集中的脉管系统分类准确性和95%CI为最佳执行模型的98.7%([98.3,99.1]%)。 DLA推理用户时间为23图像吞吐量为17秒。总之,30层DLA模型表现出较大的网络和DLA推理计算时间不是目前临床实践的限制因素。

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