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Radiomics biomarkers for accurate tumor progression prediction of oropharyngeal cancer

机译:辐射瘤生物标志物,用于精确肿瘤进展预测口咽癌

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Accurate tumor progression prediction for oropharyngeal cancers is crucial for identifying patients who would best be treated with optimized treatment and therefore minimize the risk of under- or over-treatment. An objective decision support system that can merge the available radiomics, histopathologic and molecular biomarkers in a predictive model based on statistical outcomes of previous cases and machine learning may assist clinicians in making more accurate assessment of oropharyngeal tumor progression. In this study, we evaluated the feasibility of developing individual and combined predictive models based on quantitative image analysis from radiomics, histopathology and molecular biomarkers for oropharyngeal tumor progression prediction. With IRB approval, 31, 84, and 127 patients with head and neck CT (CT-HN), tumor tissue microarrays (TMAs) and molecular biomarker expressions, respectively, were collected. For 8 of the patients all 3 types of biomarkers were available and they were sequestered in a test set. The CT-HN lesions were automatically segmented using our level sets based method. Morphological, texture and molecular based features were extracted from CT-HN and TMA images, and selected features were merged by a neural network. The classification accuracy was quantified using the area under the ROC curve (AUC). Test AUCs of 0.87, 0.74, and 0.71 were obtained with the individual predictive models based on radiomics, histopathologic, and molecular features, respectively. Combining the radiomics and molecular models increased the test AUC to 0.90. Combining all 3 models increased the test AUC further to 0.94. This preliminary study demonstrates that the individual domains of biomarkers are useful and the integrated multi-domain approach is most promising for tumor progression prediction.
机译:对口咽癌症的准确肿瘤进展预测对于鉴定最佳治疗的患者至关重要,从而最大限度地减少了或过度治疗的风险。一种客观决策支持系统,可以在基于先前病例和机器学习的统计模型中合并可用的放射性,组织病理学和分子生物标志物,可以帮助临床医生对口咽肿瘤进展进行更准确的评估。在这项研究中,我们评估了基于从射频,组织病理学和分子生物标志物的定量图像分析来开发个体和组合预测模型的可行性,用于口咽肿瘤进展预测。采用IRB认证,31,84和127名头部CT(CT-HN),肿瘤组织微阵列(TMA)和分子生物标志物表达分别被收集。对于8例患者,所有3种类型的生物标志物可获得,并且它们在试验组中螯合。使用基于级别的方法自动分割CT-HN病变。从CT-HN和TMA图像中提取形态,纹理和分子特征,并由神经网络合并选择的特征。使用ROC曲线(AUC)下的区域量化分类精度。基于射频,组织病理学和分子特征分别使用各个预测模型获得0.87,0.74和0.71的测试AUC。结合着辐射瘤和分子模型增加了测试AUC至0.90。结合所有3种模型将测试AUC进一步增加到0.94。该初步研究表明,生物标志物的个体域是有用的,并且集成的多域方法对于肿瘤进展预测最有前途。

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