首页> 外文会议>IAPR International Workshop on Pattern Recognition in Bioinformatics >cDNA-Derived Amino Acid Sequence from Rat Brain A{sub}(2a)R Possesses Conserved Motifs PMNYM of TM 5 Domain, Which May Be Involved in Dimerization of A{sub}(2a)R
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cDNA-Derived Amino Acid Sequence from Rat Brain A{sub}(2a)R Possesses Conserved Motifs PMNYM of TM 5 Domain, Which May Be Involved in Dimerization of A{sub}(2a)R

机译:来自大鼠脑A {sub}(2a)r的cDNA衍生的氨基酸序列具有TM 5结构域的PMNYM的保守基序,其可以参与{sub}(2a)r的二聚化

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The human adenosine A{sub}(2a) receptor (A{sub}(2a)R) belongs to the family of G-protein coupled receptors (GPCRs), characterized by seven transmembrane (TM) helices. TMs are involved in various cellular processes including dimerization-mediated recognition of ligand. TM5 has been suggested to self associate and may be involved in the dimerization of A{sub}(2a)R. However the role of dimerization and the motifs involved in dimerization of TM 5 have not been revealed. To study the folding and assembly of A{sub}(2a)R, the cDNA of the adenosine A{sub}(2a)R from rat brain was isolated and sequenced (DQ098650). The computational analysis (gi|70727927|gb|AAZ07991.1|) showed that the protein of 42 amino acid residues aligned in TM 5 domain region of AA2AR_RAT (P30543). PROSITE search illustrated that the motif PMNYM was conserved in A{sub}(2a)R and the motif PMSYM was present in A{sub}(2b)R respectively. The minimal dimerization motif in the TM 5 domain of the rat A{sub}(2a) receptor sequence DQ098650 has found to be the motif PXXXM/Y.
机译:人腺苷A {sub}(2a)受体(a {sub}(2a)r)属于G蛋白偶联受体(GPCR)的系列,其特征在于七种跨膜(TM)螺旋。 TMS涉及各种细胞过程,包括二聚化介导的配体识别。 TM5已建议自我助组件,并且可以参与{Sub}(2a)r的二聚体。然而,尚未揭示二聚化的作用和涉及的二聚化的二聚化的基序。为了研究{sub}(2a)r的折叠和组装,分离和测序来自大鼠脑的腺苷A {sub}(2a)r的cDNA(DQ098650)。计算分析(GI | 70727927 | GB | AAZ07991.1 |)表明,在AA2AR_RAT的TM 5结构域区中对准的42个氨基酸残基的蛋白质(P30543)。 PROSITE搜索说明了MOTIF PMNYM在{sub}(2a)r中保存,并且图案分别存在于{sub}(2b)r中。大鼠TM 5结构域中的最小二聚映分别在大鼠A {SUB}(2A)受体序列DQ098650中发现是MOTIF PXXXM / Y.

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