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Brain Tumor Segmentation by Variability Characterization of Tumor Boundaries

机译:通过肿瘤边界的变异性表征进行脑肿瘤分割

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摘要

Automated medical image analysis can play an important role in diagnoses and treatment assessment, but integration and interpretation across heterogeneous data sources remain significant challenges. In particular, automated estimation of tumor extent in glioblastoma patients has been challenging given the diversity of tumor shapes and appearance characteristics due to differences in magnetic resonance (MR) imaging acquisition parameters, scanner variations and heterogeneity in tumor biology. With this work, we present an approach for automated tumor segmentation using multimodal MR images. The algorithm considers the variability arising from the intrinsic tumor heterogeneity and segmentation error to derive the tumor boundary and produce an estimate of segmentation error. Using the MICCAI 2015 dataset, a Dice coefficient of 0.74 was obtained for whole tumor, 0.55 for tumor core, and 0.54 for active tumor, achieving above average performance in comparison to other approaches evaluated on the BRATS benchmark.
机译:自动化的医学图像分析可以在诊断和治疗评估中发挥重要作用,但是跨异构数据源的集成和解释仍然是巨大的挑战。尤其是,鉴于胶质母细胞瘤患者的肿瘤形状和外观特征的多样性,由于磁共振(MR)成像采集参数,扫描仪变异和肿瘤生物学异质性的差异,因此自动估计肿瘤范围一直是一项挑战。通过这项工作,我们提出了一种使用多峰MR图像进行自动肿瘤分割的方法。该算法考虑了由固有的肿瘤异质性和分割误差引起的变异性,从而得出了肿瘤边界并产生了分割误差的估计值。使用MICCAI 2015数据集,整个肿瘤的Dice系数为0.74,肿瘤核心的Dice系数为0.55,活动性肿瘤的Dice系数为0.54,与BRATS基准评估的其他方法相比,获得了高于平均水平的性能。

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