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Parallel design and performance of nested filtering factorization preconditioner

机译:嵌套过滤分解预处理器的并行设计和性能

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We present the parallel design and performance of the nested filtering factorization preconditioner (NFF), which can be used for solving linear systems arising from the discretization of a system of PDEs on unstructured grids. NFF has limited memory requirements, and it is based on a two level recursive decomposition that exploits a nested block arrow structure of the input matrix, obtained priorly by using graph partitioning techniques. It also allows to preserve several directions of interest of the input matrix to alleviate the effect of low frequency modes on the convergence of iterative methods. For a boundary value problem with highly heterogeneous coefficients, discretized on three-dimensional grids with 64 millions unknowns and 447 millions nonzero entries, we show experimentally that NFF scales up to 2048 cores of Genci's Bull system (Curie), and it is up to 2.6 times faster than the domain decomposition preconditioner Restricted Additive Schwarz implemented in PETSc.
机译:我们介绍了嵌套过滤分解预处理器(NFF)的并行设计和性能,该算法可用于解决非结构化网格上PDE系统离散化引起的线性系统。 NFF具有有限的内存要求,它基于两级递归分解,该分解利用了事先通过使用图分区技术获得的输入矩阵的嵌套块箭头结构。它还允许保留输入矩阵的多个感兴趣方向,以减轻低频模式对迭代方法收敛的影响。对于具有高度异构系数的边值问题(在具有6400万个未知数和447万个非零项的三维网格上离散化),我们通过实验证明NFF可以扩展到Genci的Bull系统(Curie)的2048个核,最大为2.6。比PETSc中实现的域分解预处理器Restricted Additive Schwarz快3倍。

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