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Gene Expression Changes in Healthy Volunteers after Exposure to Traffic Related Air Pollution and Physical Activity

机译:健康志愿者接触交通相关空气污染和体育锻炼后的基因表达变化

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Background:Gene-expression enlarges the scope of conventional health effect research to the identification of potential early health biomarkers and biological mechanisms underlying pathologic responses to air pollution exposure. Aims:This study was to determine gene-expression changes in a healthy population following traffic air pollution exposures, and potential effect modification by moderate physical activity. Methods: Well controlled crossover study comparing whole blood gene-expressions pre- and 40 minutes post exposure in healthy non-smoking subjects. Exposure was for 2 hours to contrasting pollution levels while either cycling or resting. Each volunteer was to undergo four conditions (high vs. low exposure; cycling vs. resting). Microarray expression profiles were obtained using the GeneChip PrimeView Human Gene-Expression Array (Affymetrix,CA) and the GCS3000 Affymetrix platform.Microarray data were normalized using rma method. Statistical analyses were performed using limma package; enrichment analysis using Gene Ontoloty (GO). Results: Ultrafine particles, elemental carbon, and nitric oxides levels at the high exposure site were on average 5, 7, and 10 times higher than the low exposure site, respectively. Twenty-eight volunteers completed all 4 exposure combinations (53,6% females; mean age 34,4 years). At 10% FDR cycling in low air pollution led to a deregulation of 224 genes, while cycling in high air pollution to 55 genes. No gene deregulation was found as a consequence of air pollution in either scenario (resting or cycling). Enrichment analysis for exercise in low pollution levels revealed several over-represented GO categories including lymphocyte activation, muscular activity response or muscle tissue development. Conclusions: Preliminary analysis suggests that gene-expression deregulations can be attributed to the exercise rather than to the air pollution. Ongoing statistical analysis is expected to verify findings and to inform about specific pathways.
机译:背景:基因表达扩大了常规健康影响研究的范围,以鉴定潜在的早期健康生物标记物和对暴露于空气污染的病理反应基础的生物学机制。目的:本研究旨在确定健康人群中交通空气污染暴露后基因表达的变化以及适度体育锻炼对潜在影响的影响。方法:对照良好的交叉研究比较健康非吸烟受试者暴露前和暴露后40分钟的全血基因表达。骑车或休息时暴露2小时以对比污染水平。每个志愿者都要经历四个条件(高暴露与低暴露;骑自行车与休息)。使用GeneChip PrimeView人基因表达阵列(Affymetrix,CA)和GCS3000 Affymetrix平台获得微阵列表达谱。使用rma方法对微阵列数据进行标准化。使用limma软件包进行统计分析;使用基因本体(GO)进行富集分析。结果:高暴露位点的超细颗粒,元素碳和一氧化氮含量分别比低暴露位点平均分别高5、7和10倍。 28名志愿者完成了所有4种暴露组合(女性为53.6%;平均年龄为34.4岁)。在10%FDR下,在低空气污染下循环会导致224个基因的失控,而在高空气污染下循环会导致55个基因。在任何情况下(休息或骑自行车),均未发现由于空气污染而导致基因失调。在低污染水平下进行的运动富集分析显示,GO的几种代表性过高,包括淋巴细胞激活,肌肉活动反应或肌肉组织发育。结论:初步分析表明,基因表达失调可以归因于运动而不是空气污染。预期正在进行的统计分析将验证发现并告知特定途径。

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