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Simulating Cancer Growth Using Cellular Automata to Detect Combination Drug Targets

机译:使用细胞自动机检测组合药物靶点模拟癌症的生长

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Cancer treatment is a fragmented and varied process, as "cancer" is really hundreds of different diseases. The "hallmarks of cancer" were proposed by Hanahan and Weinberg in 2000 and gave a framework for viewing cancer as a single disease - one where cells have acquired ten properties that are common to almost all cancers, allowing them to grow uncontrollably and ravage the body. We used a cellular automata model of tumour growth paired with lattice Boltzmann methods modelling oxygen flow to simulate combination drugs targeted at knocking out pairs of hallmarks. We found that knocking out some pairs of cancer-enabling hallmarks did not prevent tumour formation, while other pairs significantly prevent cancer from growing beyond a few cells (p=0.0004 using Wilcoxon signed-rank adjusted with Bonferroni for multiple comparisons) . This is not what would be expected from models of knocking out the hallmarks individually, as many pairs did not have an additive effect but either had no effect or a multiplicative one. We propose that targeting certain pairs of cancer hallmarks, specifically cancer's ability to induce blood vessel development paired with another cancer hallmark, could prove an effective cancer treatment option.
机译:癌症治疗是一个分散而多样的过程,因为“癌症”实际上是数百种不同的疾病。 Hanahan和Weinberg在2000年提出了“癌症标志”,并提出了一种框架,将癌症视为一种疾病-一种细胞获得了几乎所有癌症共有的十种特性,从而使其不受控制地生长并破坏了人体。 。我们将肿瘤生长的细胞自动机模型与模拟氧气流的晶格Boltzmann方法配对使用,以模拟旨在剔除成对标记的组合药物。我们发现敲除一些成对的致癌标志并不能阻止肿瘤的形成,而另一些对则可以显着地阻止癌的生长超过少数细胞(使用Bonferroni进行校正的Wilcoxon带符号秩的多重比较,p = 0.0004)。这不是从单独剔除这些标记的模型中所期望的,因为许多对没有加性效应,但既没有效应也没有乘法效应。我们建议针对某些癌症标志,特别是癌症诱导血管发育的能力与另一个癌症标志配对,可以证明是一种有效的癌症治疗选择。

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