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Fast graph-based medical image segmentation with expert guided statistical information

机译:基于图的快速医学图像分割,带有专家指导的统计信息

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In radiotherapy treatment planning, delineation of normal organs at risk in images is one of the most time-consuming tasks carried out routinely by human experts. Previously we proposed a speedy semi-automatic segmentation method based on a statistical graphical model, Conditional Random Field (CRF,) from which an energy function is defined to obtain Maximum-a-posteriori (MAP) estimation of the segmentation via a fast graph cut algorithm. The probabilistic regional and boundary terms in the energy function are estimated from the training samples collected locally from the the human expert via interactive tool or a training database. In this paper, we present a simple acceleration technique that dramatically improves the speed without sacrificing the accuracy of the segmentation. In the context of slice-by-slice medical image segmentation, we accelerate the process by partially reusing the graph constructed from a previous segmented slice based on the likeness of two consecutive images. Experiment results in 5 liver cases show differences between the manually segmented volumes and our estimated volumes were less than 5%. The differences are within the normal variation of manual segmentation from inter- and intra-observers. Accelerated segmentations show no degradation in terms of accuracy compared to full segmentations. The computation time per slice is within 300 millisecond CPU time for full segmentation and 110 millisecond for accelerated segmentation. The semi-automatic segmentation method proposed achieves similar segmentation done by human expert in significantly lesser time while preserving the human oversight required during the treatment planning process.
机译:在放射治疗治疗计划中,在图像中描绘有风险的正常器官是人类专家常规执行的最耗时的任务之一。以前,我们提出了一种基于统计图形模型的快速半自动分割方法,即条件随机场(CRF),从中定义了能量函数,可以通过快速图割获得最大后验(MAP)分割估计算法。能量函数中的概率区域项和边界项是通过交互式工具或训练数据库从人类专家本地收集的训练样本中估算得到的。在本文中,我们提出了一种简单的加速技术,可在不牺牲分割精度的情况下显着提高速度。在逐片医学图像分割的背景下,我们基于两个连续图像的相似性,通过部分重用从先前分割的切片构建的图来加速此过程。 5例肝脏病例的实验结果表明,手动分割的体积之间的差异,我们的估计体积小于5%。差异在观察者之间和观察者之间的手动分割的正常变化之内。与完整的细分相比,加速的细分在准确性方面没有任何下降。对于完整分段,每个切片的计算时间在300毫秒CPU时间以内,对于加速分段,每个切片的计算时间在110毫秒以内。提出的半自动分割方法可在相当短的时间内实现由人类专家完成的类似分割,同时保留了治疗计划过程中所需的人类监督。

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