首页> 外文会议>Logic Programming >Using Hybrid Concurrent Constraint Programming to Model Dynamic Biological Systems
【24h】

Using Hybrid Concurrent Constraint Programming to Model Dynamic Biological Systems

机译:使用混合并行约束编程对动态生物系统进行建模

获取原文

摘要

Systems biology is a new area in biology that aims at achieving a systems-level understanding of biological systems. While current genome projects provide a huge amount of data on genes or proteins, lots of research is still necessary to understand how the different parts of a biological system interact in order to perform complex biological functions. Computational models that help to analyze, explain or predict the behavior of biological systems play a crucial role in systems biology. The goal of this paper is to show that hybrid concurrent constraint programming may be a promising alternative to existing modeling approaches in systems biology. Hybrid cc is a declarative compositional programming language with a well-defined semantics. It allows one to model and simulate the dynamics of hybrid systems, which exhibit both discrete and continuous change. We show that Hybrid cc can be used naturally to model a variety of biological phenomena, such as reaching thresholds, kinetics, gene interaction or biological pathways.
机译:系统生物学是生物学的一个新领域,旨在实现对生物学系统的系统级理解。尽管当前的基因组计划提供了大量有关基因或蛋白质的数据,但仍需要进行大量研究才能理解生物系统的不同部分如何相互作用以执行复杂的生物学功能。帮助分析,解释或预测生物系统行为的计算模型在系统生物学中起着至关重要的作用。本文的目的是表明混合并发约束编程可能是系统生物学中现有建模方法的有前途的替代方法。 Hybrid cc是具有明确定义的语义的声明性组合编程语言。它允许人们对混合系统的动力学建模和仿真,该系统既显示离散变化又显示连续变化。我们表明,Hybrid cc可自然用于建模多种生物学现象,例如达到阈值,动力学,基因相互作用或生物学途径。

著录项

相似文献

  • 外文文献
  • 中文文献
  • 专利
获取原文

客服邮箱:kefu@zhangqiaokeyan.com

京公网安备:11010802029741号 ICP备案号:京ICP备15016152号-6 六维联合信息科技 (北京) 有限公司©版权所有
  • 客服微信

  • 服务号