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Brain Tumor Cell Density Estimation from Multi-modal MR Images Based on a Synthetic Tumor Growth Model

机译:基于合成肿瘤生长模型的多模态MR图像脑肿瘤细胞密度估计

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This paper proposes to employ a detailed tumor growth model to synthesize labelled images which can then be used to train an efficient data-driven machine learning tumor predictor. Our MR image synthesis step generates images with both healthy tissues as well as various tumoral tissue types. Subsequently, a discriminative algorithm based on random regression forests is trained on the simulated ground truth to predict the continuous latent tumor cell density, and the discrete tissue class associated with each voxel. The presented method makes use of a large synthetic dataset of 740 simulated cases for training and evaluation. A quantitative evaluation on 14 real clinical cases diagnosed with low-grade gliomas demonstrates tissue class accuracy comparable with state of the art, with added benefit in terms of computational efficiency and the ability to estimate tumor cell density as a latent variable underlying the multimodal image observations. The idea of synthesizing training data to train data-driven learning algorithms can be extended to other applications where expert annotation is lacking or expensive.
机译:本文提出采用详细的肿瘤生长模型来合成标记图像,然后将其用于训练有效的数据驱动的机器学习肿瘤预测因子。我们的MR图像合成步骤可生成具有健康组织以及各种肿瘤组织类型的图像。随后,在模拟的地面实况上训练了基于随机回归森林的判别算法,以预测连续的潜在肿瘤细胞密度以及与每个体素相关的离散组织类别。提出的方法利用了740个模拟案例的大型综合数据集进行训练和评估。对诊断为低度神经胶质瘤的14个实际临床病例的定量评估表明,组织级别的准确性与现有技术相当,并且在计算效率和估计肿瘤细胞密度作为多模态图像观察基础的潜在变量的能力方面具有更多优势。 。合成训练数据以训练数据驱动的学习算法的想法可以扩展到缺少专家注释或昂贵的其他应用程序。

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