首页> 外文会议>International Conference on Unconventional Models of Computation, UMC'98 January 5-9, 1998, city campus >Distributed Architectures in DNA Computing Based on Splicing: Limiting the Size of Components
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Distributed Architectures in DNA Computing Based on Splicing: Limiting the Size of Components

机译:基于剪接的DNA计算中的分布式体系结构:限制组件的大小

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Splicing systems (also called H systems) with a finite set of rules generate only regular languages. Thus, it is necessary to supplement such a system with a control mechanism on the use of rules. Many possibilities were explored in the literature. One fruitful idea is to use distributed architectures as suggested by the grammar systems theory. All the results obtained up to now in this area try to simulate Turing machines or type-0 Chomsky grammars by H systems with a minimal number of components. Here we approach an "orthogonal" problem: find computationally complete distributed H systems with as reduced as possible components (as the number of splicing rules; this is of practical interest, because the splicing rules correspond to restriction enzymes, and it is in general difficult to put several enzymes to work together, in the same reaction conditions). We prove that communicating splicing systems where each component consists of only one splicing rule characterize the recursively enumerable languages.
机译:具有有限规则集的拼接系统(也称为H系统)仅生成常规语言。因此,有必要用规则的控制机制来补充这种系统。文献中探讨了许多可能性。一个富有成果的想法是使用语法系统理论所建议的分布式体系结构。到目前为止,在该领域中获得的所有结果都试图通过最少数量的H系统模拟图灵机或0型Chomsky语法。在这里,我们解决一个“正交”问题:找到具有尽可能少的分量(如剪接规则的数量)的,计算上完整的分布式H系统;这具有实际意义,因为剪接规则与限制酶相对应,并且通常很难在相同的反应条件下将几种酶共同作用)。我们证明了通信拼接系统(其中每个组件仅包含一个拼接规则)是递归可枚举语言的特征。

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