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DPA-DenseBiasNet: Semi-supervised 3D Fine Renal Artery Segmentation with Dense Biased Network and Deep Priori Anatomy

机译:DPA-DenseBiasNet:具有密集偏向网络和深度先验解剖的半监督3D精细肾动脉分割

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3D fine renal artery segmentation on abdominal CTA image targets on the segmentation of the complete renal artery tree which will help clinicians locate the interlobar artery's corresponding blood feeding region easily. However, it is still a challenging task that no one has reported success due to the large intra-scale changes, large inter-anatomy variation, thin structures, small volume ratio and limitation of labeled data. Hence, in this paper, we propose a novel semi-supervised learning framework named DPA-DenseBiasNet for 3D fine renal artery segmentation. The dense biased connection method is presented for multi-receptive field feature maps merging and implicit deep supervision [5] which enable the network to adapt to large intra-scale changes and improve its training process. The dense biased network (DenseBiasNet) is designed based on this method. We develop deep priori anatomy (DPA) for semi-supervised learning of thin structures. Differ from other semi-supervised methods, it embeds priori anatomical features to segmentation network which avoids inaccurate results sensitive to thin structures as optimizing targets, so that the network achieves generalization of different anatomies with the help of unlabeled data. Only 26 labeled and 118 unlabeled images were used to train our framework and it achieves satisfactory results on the testing dataset. The mean centerline voxel distance is 1.976 which reduced by 3.094 compared to 3D U-Net. The results illustrate that our framework has great prospects in the diagnosis and treatment of kidney disease.
机译:腹部CTA图像上的3D细肾动脉分割目标对准完整的肾动脉树的分割,这将有助于临床医生轻松地确定小叶间动脉的相应供血区域。然而,由于尺度内变化大,解剖间变化大,结构薄,体积比小和标记数据的局限性,没有人报告成功仍然是一项艰巨的任务。因此,在本文中,我们提出了一种新颖的半监督学习框架DPA-DenseBiasNet,用于3D精细肾动脉分割。提出了密集偏置连接方法,用于多接收场特征图的合并和隐式深度监控[5],使网络能够适应大范围内的变化并改善其训练过程。基于这种方法设计了密集偏置网络(DenseBiasNet)。我们开发了用于薄结构的半监督学习的深层先验解剖学(DPA)。与其他半监督方法不同,它在分割网络中嵌入了先验解剖特征,从而避免了对薄结构敏感的不准确结果作为优化目标,因此该网络借助未标记的数据实现了不同解剖结构的泛化。仅使用26张标记的图像和118张未标记的图像来训练我们的框架,它在测试数据集上取得了令人满意的结果。平均中心线体素距离为1.976,与3D U-Net相比减少了3.094。结果表明,我们的框架在肾脏疾病的诊断和治疗中具有广阔的前景。

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