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Morphological segmentation of multiprobe fluorescence images for immunophenotyping in melanoma tissue sections

机译:黑色素瘤组织切片免疫表型​​多探针荧光图像的形态学分割

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Abstract: A fundamental task in studying the action of cancer chemotherapy is to determine the quantity and spatial relationship of tumor-infiltrating lymphocyte populations. Classically this is performed by staining thin tissue sections with antibodies by immunoperoxidase amplification. The staining technique is practically limited to locating a single cell type per tissue section. Full immunophenotyping requires successive staining of serial sections, using statistical analysis to correlate the results. This paper describes a system that brings together multi- parameter fluorescence imaging and morphological segmentation techniques to provide a fast, accurate, and automatic analysis of the lymphocyte infiltrate in tissue sections. With fluorescence techniques a single section can be stained with up to four distinct fluorescently labelled antibodies to determine cell phenotypes. To harness this potential computer vision techniques are required to analyze the images. A routine based on the water shed algorithm has been developed that segments the nuclei image with an accuracy of greater than 90%. By matching the nuclei boundaries to the local peak fluorescence, cell boundary estimates are obtained in the antigen images. By then extracting two measurements from the boundary signal the cells can be classified according to their antigen expression. Determining cell expression of multiple antigens simultaneously provides a more detailed and accurate picture of the tumor infiltrate than single parameter analysis, and increases understanding of the immune response associated with the chemotherapy. !10
机译:摘要:研究癌症化疗作用的一项基本任务是确定肿瘤浸润淋巴细胞的数量和空间关系。传统上,这是通过免疫过氧化物酶扩增将薄组织切片用抗体染色来完成的。染色技术实际上仅限于在每个组织切片中定位单个细胞类型。完整的免疫表型分析需要对连续切片进行连续染色,并使用统计分析将结果关联起来。本文描述了一个系统,该系统将多参数荧光成像和形态学分割技术结合在一起,可提供对组织切片中淋巴细胞浸润的快速,准确和自动的分析。使用荧光技术,单个切片可以用多达四种不同的荧光标记抗体染色以确定细胞表型。为了利用这种潜在的计算机视觉技术,需要分析图像。已经开发了一种基于流水算法的例程,该例程可以以大于90%的精度分割核图像。通过使核边界与局部峰值荧光匹配,可以在抗原图像中获得细胞边界估计。通过从边界信号中提取两个测量值,可以根据细胞的抗原表达对细胞进行分类。同时测定多种抗原的细胞表达可以提供比单参数分析更为详尽和准确的肿瘤浸润情况,并增加对与化疗相关的免疫反应的了解。 !10

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