首页> 外文会议>Optical Biopsy XVII: Toward Real-Time Spectroscopic Imaging and Diagnosis >Semi-automated machine learning approach to segment and register tissue oxygenation maps onto clinical images of wounds
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Semi-automated machine learning approach to segment and register tissue oxygenation maps onto clinical images of wounds

机译:半自动机器学习方法,将组织氧合图分割并记录到伤口的临床图像上

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Near-infrared (NIR) spectroscopic imaging of wounds has been performed by past researchers to obtain tissueoxygenation at discrete point locations. We had developed a near-infrared optical scanner (NIROS) that performs noncontactNIR spectroscopic (NIRS) imaging to provide 2D tissue oxygenation maps of the entire wounds. Regions ofchanged oxygenation have to be demarcated and registered with respect to visual white light images of the wound.Herein, a semi-automatic image segmentation and co-registration approach using machine learning has been developedto differentiate regions of changed tissue oxygenation. A registration technique was applied using a transformationmatrix approach using specific markers across the white light image and the NIR images (or tissue oxygenation maps).This allowed for physiological changes observed from hemodynamic changes to be observed in the RGB white lightimage as well. Semi-automated segmentation techniques employing graph cuts algorithms was implemented todemarcate the 2D tissue oxygenation maps depicting regions of increased or decreased oxygenation and further coregisteredonto the white light images. The developed registration technique was validated via phantom studies (both flatand curved phantoms) and in-vivo studies on controls, demonstrating an accuracy >97%. The technique was furtherimplemented on wounds (here, diabetic foot ulcers) across weeks of treatment. Regions of decreased oxygenation weredemarcated, and its area estimated and co-registered in comparison to the clinically demarcated wound area. Future workinvolves the development of automated machine learning approaches of image analysis for clinicians to obtain real-timeco-registered clinical and subclinical assessments of the wound.
机译:过去的研究人员已经对伤口进行了近红外(NIR)光谱成像,以获取离散点位置处的组织\氧合。我们已经开发了一种近红外光学扫描仪(NIROS),该扫描仪执行非接触\ r \ nNIR光谱(NIRS)成像,以提供整个伤口的2D组织氧合图。 \ r \ n变化的氧合区域必须相对于伤口的可见白光图像进行划界和注册。\ r \ n在此,已开发出一种使用机器学习的半自动图像分割和共配准方法\ r \ n区分变化的组织氧合区域。使用变换\ r \ n矩阵方法,在白光图像和NIR图像(或组织氧合图)上使用特定标记,应用了配准技术。\ r \ n这允许在RGB中观察到从血流动力学变化观察到的生理变化。白光\ r \ n图像也是如此。实施了采用图割算法的半自动分割技术,以划定2D组织氧合图,该图描绘了氧合增加或减少的区域,并进一步与白光图像共配准。通过体模研究(平面\ r \ n和弯曲体模)和对照的体内研究对开发的配准技术进行了验证,证明其准确性> 97%。经过数周的治疗,该技术进一步应用于伤口(此处为糖尿病足溃疡)。与临床划定的伤口面积相比,减少了氧合减少的区域,并估计了其面积并进行了配准。未来的工作涉及为临床医生开发图像分析自动机器学习方法,以获得对伤口的实时\ r \ n注册的临床和亚临床评估。

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    Optical Imaging Laboratory, Department of Biomedical Engineering, Florida International University, Miami, FL 33174;

    Optical Imaging Laboratory, Department of Biomedical Engineering, Florida International University, Miami, FL 33174;

    Smart Medical Informatics Learning and Evaluation, University of Florida, J. Crayton Pruitt Family, Department of Biomedical Engineering;

    Optical Imaging Laboratory, Department of Biomedical Engineering, Florida International University, Miami, FL 33174;

    Optical Imaging Laboratory, Department of Biomedical Engineering, Florida International University, Miami, FL 33174;

    Optical Imaging Laboratory, Department of Biomedical Engineering, Florida International University, Miami, FL 33174;

    Podiatry Care Partners Inc., Doral, FL;

    Optical Imaging Laboratory, Department of Biomedical Engineering, Florida International University, Miami, FL 33174;

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