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Distribution and diversity of eukaryotic microalgae in Kuwait waters assessed using 18S rRNA gene sequencing

机译:使用18S rRNA基因测序评估科威特水域真核微藻的分布和多样性

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The microbial communities play a crucial role in ecosystem functioning through interactions among individuals and taxonomic groups in a highly dynamic marine ecosystem. The structure and functioning of the microbial communities are often influenced by the changes in the surrounding environment. Monitoring the microbial diversity of the marine ecosystem helps to understand spatial patterns of microbial community and changes due to season, climate, and various drivers of biological diversity. Kuwait is characterized by an arid environment with a high degree of temperature variation during summer and winter. Our understanding of spatial distribution patterns of microbial communities, their diversity, and the influence of human activities on the degree of changes in the diversity of the microbial community in Kuwait territorial waters remain unclear. In this study, we employed 18S rRNA sequencing to explore marine microalgal community composition and dynamics in seawater samples collected from Kuwait waters over two seasonal cycles across six locations. A total of 448,184 sequences across 36 replicates corresponding to 12 samples from six stations were obtained. The quality-filtered sequences were clustered into 1,293 representative sequences, which were then classified into different eukaryotic taxa. This study reveals that the phytoplankton community in Kuwait waters is diverse and shows significant variations among different taxa during summer and winter. Dinoflagellates and diatoms were the most abundant season-dependent microalgae taxa in Kuwait waters. Alexandrium and Pyrophacus were abundant in summer, whereas Gonyaulax was abundant during the winter. The abundance of Coscinodiscus and Navicula , of the diatom genera, were also dependent upon both seasonal and possible anthropogenic factors. Our results demonstrate the effectiveness of a sequencing-based approach, which could be used to improve the accuracy of quantitative eukaryotic microbial community profiles.
机译:微生物社区在高动态海洋生态系统中通过相互作用在生态系统中发挥着至关重要的作用。微生物社区的结构和功能通常受周围环境变化的影响。监测海洋生态系统的微生物多样性有助于了解微生物群落的空间模式,并由于季节,气候和各种生物多样性驱动程序而变化。科威特的特点是在夏季和冬季具有高度温度变化的干旱环境。我们对微生物社区的空间分布模式,它们的多样性以及人类活动对科威特领海中微生物群落多样性变化程度的理解仍不明确。在这项研究中,我们使用18秒的RRNA测序来探讨从科威特水域收集的海水样本中的海洋微藻群落组成和动力学在六个地点的两个季节性周期上。获得了36个重复的总共448,184个序列,对应于来自六个站的12个样品。将质量过滤的序列聚集成1,293个代表性序列,然后分为不同的真核分类序列。本研究表明,科威特水域的浮游植物群落多样化,夏季和冬季不同的分类群不同。 Dinoflagellates和硅藻是科威特水域中最丰富的季节依赖性微藻曲线。亚历山大和热池在夏季很丰富,而Gonyaulax在冬季很丰富。硅藻土的丰富的Coscinodiscus和Navicula也依赖于季节性和可能的​​人为因素。我们的结果证明了基于测序的方法的有效性,可用于提高定量真核微生物群落型材的准确性。

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